Hi,
The "cluster" command has an output (--osize) which encodes the size of
the cluster in each voxel inside the cluster. You can then threshold this with
fslmaths at whatever size you want in order to make a mask and then apply
that to the data.
All the best,
Mark
On 4 Jan 2012, at 15:36, vin rasa wrote:
> Dear FSL experts,
>
> Is there command to threshold a group of small cluster nifti file, where I can see, only clusters bigger then i.e. 5 voxels. may be some option in FSLMATHS ?
>
> Thank you
>
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