I am not sure what you mean by clashing at 0.4A - such a site must mean
something is wrong.
coot will select resasonable waters for you - it is very conservative.
refmac and other software lists clashes and you should do something about
them - move protein - delete water - worry!
Eleanor
On Fri, 6 Jan 2012 02:05:44 -0800, Dialing Pretty <[log in to unmask]>
wrote:
> Dear All,
>
> Will you please tell me which program can process water picking by only
> selecting those clashing with the protein atoms less than 0.4 A?
>
> Cheers,
>
> Dialing
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