Dear SPM users,
I have run into a problem concerning the display of SPM8 results of a single subject (healthy subject). The results are shifted downwards and very small in size compared to the glass brain (see file "mask_sx.bmp" for illustration). I checked the mask image created in the result folder after first level design matrix estimation and it was way smaller than the glass brain and different from other 18 subjects' masks.
I checked all the preprocessing steps. Coreg, segmentation, normalization all worked and final images are all aligned with the templates provided by SPM.
One note about this subject might be worth to mention here: the origin of her anatomy was manually adjusted to the AC-PC plane before segmentation else the segmentation created weird results (i.e half of the brain is black, scattered gray scale inflated brain etc)
Does anybody know what might be the problem?
Thank you in advance
idil kokal
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