Hi every one
I have a problem with docking my ligand into the electron density map and make the connections ( bonds ) with the protein.
It is a Lysine residue that makes a Schiff Base with a long chain aldehyde.
I do not know how to make the bonds and control the torsion angles of the ligand.
I am using the CCP4 and Coot program for refining.
Thanks
Sam
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