Welcome to the quirks of RNA crystallography. It is a small community in a sea of protein crystallographers so expect to get used to work arounds to get things to work.
Your answers are at the coot mailing list archives (we recently had a discussion regarding coot 0.6.2 ver 3562) .
https://www.jiscmail.ac.uk/cgi-bin/webadmin?A1=ind1108&L=COOT
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On Aug 17, 2011, at 10:10 AM, Eric Karg wrote:
> Thanks for the suggestions. I could solve the problem by using the setenv command to the coot directory,but I still cannot use the Real Space Refine Zone in Coot because the names are not compatible. I'm trying to build an RNA molecule by the way.
>
> Any suggestions?
>
> Eric
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Francis E. Reyes M.Sc.
215 UCB
University of Colorado at Boulder
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