voxmean=$(fslstats img -M);
voxnum=$(fslstats img -V | awk '{print $1}');
voxsum=$(echo "$voxmean*$voxnum" | bc);
Auer, Tibor M.D. Ph.D.
Biomedizinische NMR Forschungs GmbH
am Max-Planck Institut für Biophysikalische Chemie
Am Fassberg 11
37077 Göttingen
Germany
Phone/Work: +49-(0)551-201-1725
Mobile: +49-(0)176-8012-7921
E-Mail: [log in to unmask]
-----Original Message-----
From: FSL - FMRIB's Software Library [mailto:[log in to unmask]] On Behalf Of Gabor Perlaki
Sent: Thursday, July 28, 2011 4:42 PM
To: [log in to unmask]
Subject: [FSL] fsl_tools
Hi all,
Is there any tool in fsl which could sum the positive voxel values in a 3D volume?
Thanks, Gabor
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