Hi,
actually, I did (see attachment, renamed to testmask). It looks ok to
me, the spot with intensity 100 superimposed onto the MNI152 brain
looks like it is situated where I want it to be. However, the
coordinates given by Fslview are not the same as the ones I supplied
with the command.
Thanks and best regards,
Cornelius
On Fri, Jun 10, 2011 at 5:31 PM, Stephen Smith <[log in to unmask]> wrote:
> Hi - have you tried running the very first command in the log by hand and
> checking the output in FSLView?
> Cheers.
>
> On 10 Jun 2011, at 16:13, Cornelius Werner wrote:
>
> Hello all,
>
> I seem to be unable to query my 2nd level FEAT data with Featquery
> when the registration has been done with FNIRT. Running Featquery on
> basically the same dataset that has been registered to MNI space using
> FLIRT runs fine, however! There also seems to be a problem with path
> variables. The log for one of the subjects is attached. Is there
> anything I can do?
>
> Thanks for any help,
> Cornelius
>
> --
> Dr. med. Cornelius J. Werner
> Department of Neurology
> RWTH Aachen University
> Pauwelsstr. 30
> 52074 Aachen
> Germany
> <report.log>
>
> ---------------------------------------------------------------------------
> Stephen M. Smith, Professor of Biomedical Engineering
> Associate Director, Oxford University FMRIB Centre
>
> FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK
> +44 (0) 1865 222726 (fax 222717)
> [log in to unmask] http://www.fmrib.ox.ac.uk/~steve
> ---------------------------------------------------------------------------
>
>
>
>
--
Dr. med. Cornelius J. Werner
Department of Neurology
RWTH Aachen University
Pauwelsstr. 30
52074 Aachen
Germany
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