Hi All,
A couple of problems have recently arisen. I am using pseudo-3D
relaxation experiments and when I attempted to select the side chain
resonances before intialising the peak list, I got the following traceback:
Exception in Tkinter callback
Traceback (most recent call last):
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/python2.6/lib/python2.6/lib-tk/Tkinter.py",
line 1410, in __call__
return self.func(*args)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/memops/gui/ScrolledMatrix.py",
line 746, in mouseClick
self.selectCell(row,col)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/memops/gui/ScrolledMatrix.py",
line 1839, in selectCell
self.callback(self.currentObject, objRow, objCol)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/InitRootAssignments.py",
line 435, in selectAmidePair
self.followPeaks()
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/InitRootAssignments.py",
line 357, in followPeaks
zoomToShowPeaks(self.amidePair, self.windowPane)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/core/WindowBasic.py",
line 1815, in zoomToShowPeaks
for i, (ppmA, ppmB) in enumerate(region):
TypeError: 'NoneType' object is not iterable
Secondly, when I attempt to navigate between peak lists and pick peaks
in the spectrum, the peak list doesn't refresh to show the selected one
and I have the following traceback:
Exception in Tkinter callback
Traceback (most recent call last):
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/python2.6/lib/python2.6/lib-tk/Tkinter.py",
line 1410, in __call__
return self.func(*args)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/memops/gui/ScrolledWindow.py",
line 1032, in <lambda>
cmd = lambda event, button=button, state=state:
self.releaseFunc(event, button, state)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/memops/gui/ScrolledWindow.py",
line 1005, in releaseFunc
func(event)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/memops/gui/ScrolledWindow.py",
line 1597, in selectLocation
self.select_single_func(event.widget, a, b, x, y, button, state,
event=event)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/frames/WindowFrame.py",
line 1936, in selectSingle
self.menuPeak = self.createNewPeak(a, b, row, col)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/frames/WindowFrame.py",
line 2001, in createNewPeak
parent=self.topPopup, doFit=False)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/core/PeakBasic.py",
line 1705, in addPeak
setPeakPosition(peak, position, tile)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/core/PeakBasic.py",
line 1815, in setPeakPosition
peakDim.position = position[dim]
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/ccp/api/nmr/Nmr.py",
line 55061, in setPosition
+ ": %s" % (value,)
ApiError: ccp.nmr.Nmr.PeakDim.setPosition:
position constraint position_ge_1 violated by value: 0.0
Exception in Tkinter callback
Traceback (most recent call last):
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/python2.6/lib/python2.6/lib-tk/Tkinter.py",
line 1410, in __call__
return self.func(*args)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/memops/gui/ScrolledWindow.py",
line 1032, in <lambda>
cmd = lambda event, button=button, state=state:
self.releaseFunc(event, button, state)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/memops/gui/ScrolledWindow.py",
line 1005, in releaseFunc
func(event)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/memops/gui/ScrolledWindow.py",
line 1597, in selectLocation
self.select_single_func(event.widget, a, b, x, y, button, state,
event=event)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/frames/WindowFrame.py",
line 1936, in selectSingle
self.menuPeak = self.createNewPeak(a, b, row, col)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/frames/WindowFrame.py",
line 2001, in createNewPeak
parent=self.topPopup, doFit=False)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/core/PeakBasic.py",
line 1705, in addPeak
setPeakPosition(peak, position, tile)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/core/PeakBasic.py",
line 1815, in setPeakPosition
peakDim.position = position[dim]
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/ccp/api/nmr/Nmr.py",
line 55061, in setPosition
+ ": %s" % (value,)
ApiError: ccp.nmr.Nmr.PeakDim.setPosition:
position constraint position_ge_1 violated by value: 0.0
Exception in Tkinter callback
Traceback (most recent call last):
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/python2.6/lib/python2.6/lib-tk/Tkinter.py",
line 1410, in __call__
return self.func(*args)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/memops/gui/Menu.py",
line 309, in <lambda>
options_copy['command'] = lambda: func(self.menu_event)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/frames/WindowFrame.py",
line 1565, in createPeak
self.createNewPeak(a, b, row, col)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/frames/WindowFrame.py",
line 2001, in createNewPeak
parent=self.topPopup, doFit=False)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/core/PeakBasic.py",
line 1705, in addPeak
setPeakPosition(peak, position, tile)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/core/PeakBasic.py",
line 1815, in setPeakPosition
peakDim.position = position[dim]
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/ccp/api/nmr/Nmr.py",
line 55061, in setPosition
+ ": %s" % (value,)
ApiError: ccp.nmr.Nmr.PeakDim.setPosition:
position constraint position_ge_1 violated by value: 0.0
Exception in Tkinter callback
Traceback (most recent call last):
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/python2.6/lib/python2.6/lib-tk/Tkinter.py",
line 1410, in __call__
return self.func(*args)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/memops/gui/ScrolledWindow.py",
line 1032, in <lambda>
cmd = lambda event, button=button, state=state:
self.releaseFunc(event, button, state)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/memops/gui/ScrolledWindow.py",
line 1005, in releaseFunc
func(event)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/memops/gui/ScrolledWindow.py",
line 1597, in selectLocation
self.select_single_func(event.widget, a, b, x, y, button, state,
event=event)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/frames/WindowFrame.py",
line 1936, in selectSingle
self.menuPeak = self.createNewPeak(a, b, row, col)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/frames/WindowFrame.py",
line 2001, in createNewPeak
parent=self.topPopup, doFit=False)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/core/PeakBasic.py",
line 1705, in addPeak
setPeakPosition(peak, position, tile)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/core/PeakBasic.py",
line 1815, in setPeakPosition
peakDim.position = position[dim]
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/ccp/api/nmr/Nmr.py",
line 55061, in setPosition
+ ": %s" % (value,)
ApiError: ccp.nmr.Nmr.PeakDim.setPosition:
position constraint position_ge_1 violated by value: 0.0
Exception in Tkinter callback
Traceback (most recent call last):
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/python2.6/lib/python2.6/lib-tk/Tkinter.py",
line 1410, in __call__
return self.func(*args)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/python2.6/lib/python2.6/lib-tk/Tkinter.py",
line 495, in callit
func(*args)
File
"/afs/gorlaeus.net/lic/metprot/software/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/frames/PeakTableFrame.py",
line 999, in updatePeaksFromList
value = sampledDim.pointValues[int(peakDim.position)-1]
TypeError: int() argument must be a string or a number, not 'NoneType'
Any ideas what's gone wrong?
Regards
Simon
--
Simon P Skinner
Protein Chemistry Group
Leiden Institute of Chemistry, Universiteit Leiden
Phone: +31 71 527 6089 / Fax: +31 71 527 4349
E-mail : [log in to unmask]
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