Dear Mark,
As I understand tr must be equal to the trslc*numslc. As I want just one slice so the times must be the same.
About the times there was some confusing, so I found in an article sometimes used in a really experiment:
TE=98.686s
TR=3100s
After find these times I run the 'pulse' and the same error occur. The command-line that I used was the following:
pulse -i brain.nii.gz -o pulse --te=98.686 --tr=3100 --trslc=3100 --nx=64 --ny=64 --dx=0.427 --dy=0.427 --maxG=0.055 --riset=0.00022 --bw=100000 --numvol=1 --numslc=1 --slcthk=0.0025 --zstart=0.09 --seq=ge --slcdir=z+ --readdir=x+ --phasedir=y+ --gap=0.0 -v --cover=100 --angle=90
Even this issue is interesting for me and my thesis, I probable find another solution for my simulation problem, that is simulate anatomical images directly from BrainWeb, and used possum to generate EPI images, where I should used the same object that BrainWeb.
I do not know if this is the better way to solve the problem, but I would like to ear your opinion.
Best Regards,
Pedro Mendes
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