Hello FSL Experts,
I am currently running ProbtrackX and was wondering about checking the registration from seed space (standard space) to diffusion space (native space). I am also using ROI's from the HarvardOxford Template that I would also like to check. After following the steps outlined on the FMRIB web page I only have transformation matrix files (*.mat) in my xfms folders. Is there a way that I can check to see if these standard space ROI's are covering the appropriate anatomical regions in diffusion space?
Cheers!
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