Mine too,
But then, there's nothing in the file.
Dave
JHU]15% ls -l /usr/local/fsl/data/atlases/JHU/
total 27168
-rw-r--r-- 1 7959 1023 1127989 12 Aug 2007 JHU-ICBM-DWI-1mm.nii.gz
-rw-r--r-- 1 7959 1023 206277 12 Aug 2007 JHU-ICBM-DWI-2mm.nii.gz
-rw-r--r-- 1 7959 1023 6748509 6 Aug 2007 JHU-ICBM-FA-1mm.nii.gz
-rw-r--r-- 1 7959 1023 922943 6 Aug 2007 JHU-ICBM-FA-2mm.nii.gz
-rw-r--r-- 1 7959 1023 2685506 12 Aug 2007 JHU-ICBM-T2-1mm.nii.gz
-rw-r--r-- 1 7959 1023 434038 12 Aug 2007 JHU-ICBM-T2-2mm.nii.gz
-rw-r--r-- 1 7959 1023 0 6 Aug 2007
JHU-ICBM-WhiteMatter-labels-2mm.nii.gz
-----Original Message-----
From: Andreas Bartsch <[log in to unmask]>
Reply-To: FSL <[log in to unmask]>
Date: Mon, 14 Feb 2011 07:46:03 +0000
To: FSL <[log in to unmask]>
Subject: [FSL] AW: [FSL] JHU-ICBM-WhiteMatter-labels-2mm.nii.gz does not
open
>same story on a Mac...
>________________________________________
>Von: FSL - FMRIB's Software Library [[log in to unmask]] im Auftrag von
>Matt Glasser [[log in to unmask]]
>Gesendet: Montag, 14. Februar 2011 03:27
>An: [log in to unmask]
>Betreff: Re: [FSL] JHU-ICBM-WhiteMatter-labels-2mm.nii.gz does not open
>
>For what its worth, attempting to open that file crashes my FSLView too.
>fslhd gives:
>
>matt@matt-desktop:/usr/share/fsl/data/atlases/JHU$ fslhd
>JHU-ICBM-WhiteMatter-labels-2mm.nii.gz
>** ERROR (nifti_image_read): short header read
>'JHU-ICBM-WhiteMatter-labels-2mm.nii.gz'
>** ERROR: nifti_image_open(JHU-ICBM-WhiteMatter-labels-2mm): bad header
>info
>Error: failed to open file JHU-ICBM-WhiteMatter-labels-2mm
>ERROR: Could not open file
>
>Peace,
>
>Matt.
>
>________________________________
>From: FSL - FMRIB's Software Library [mailto:[log in to unmask]] On
>Behalf Of Amy Zhong Sheng Zheng
>Sent: Sunday, February 13, 2011 8:21 PM
>To: [log in to unmask]
>Subject: Re: [FSL] JHU-ICBM-WhiteMatter-labels-2mm.nii.gz does not open
>
>I've tried it on a couple of machines, and it still doesn't open. The one
>called JHU-WhiteMatter-labels-2mm.nii.gz I can open, but not the one
>called JHU-ICBM-WhiteMatter-labels-2mm.nii.gz. Strange. I also tried to
>go to the John Hopkins website to download it directly, but I could only
>find the 1mm one. Do you know where I might be able to get a copy of
>JHU-ICBM-WhiteMatter-labels-2mm.nii.gz (DTI-81)?
>On Sun, Feb 13, 2011 at 5:42 PM, Michael Hanke
><[log in to unmask]<mailto:[log in to unmask]>> wrote:
>On Mon, Feb 14, 2011 at 01:36:33AM +0000, Amy wrote:
>> Hello,
>>
>> Has anyone else had problem with opening the
>> JHU-ICBM-WhiteMatter-labels-2mm.nii.gz file? Whenever I try to open it
>> on fslview, fslview just crashes; I also tried opening it on the new
>> version FSL and the same thing happened. Does anyone know what might
>> be wrong?
>opens fine on my machine. Maybe yours is corrupt?
>
>michael@meiner ~ % md5sum
>/usr/share/data/jhu-dti-whitematter-atlas/JHU/JHU-WhiteMatter-labels-2mm.n
>ii.gz
>a0d31df6d82b4d5719aa5bf61391fc98
>/usr/share/data/jhu-dti-whitematter-atlas/JHU/JHU-WhiteMatter-labels-2mm.n
>ii.gz
>
>
>
>Michael
>
>
>--
>Michael Hanke
>http://mih.voxindeserto.de
|