There should be no need for cheating any more as I have added the
intra-specific types to both Nexus and the regular Protein Seq. Assignment
via the updates. I have only done basic tests, so let me know if there are
any issues.
Also, I have given the experiment type filtering an overhaul in general,
so many more kinds should be selectable for both systems. For example you
can now work with H[N]_H.TOCSY and Hc_ccoNH.TOCSY.
T.
>>> I thought to a workaround for iHNCACB , i.e. "cheating" and telling the
>>> code it's a normal HNCACB that has lost backward peaks, but for what
>>> concerns HNCO I don't have any homologue to this trick (if it could work,
>>> of course ...).
>>> Do you have any suggestion ?
>>
>> Tim may have already added the intra experiments by the time you get this,
>> but your cheat idea is a good workaround. The cheat for iHNCO would be and
>> HNCACO.
>>
>
> Yes, I thought to HNCACO too, but in the list of loaded peaks of the
> automatic assignment window even using such definition for the type of
> spectrum it does not appear at all. At this stage I can use iHNCO only for
> confirming the assignment, not as input for Nexus (or Mars).
> The point is then, again, the possibility of modifying the allowed types of
> spectra used as entry.
> In the meantime I will start to move using what I have (and also using manual
> assignment strategy as well).
-------------------------------------------------------------------------------
Dr Tim Stevens Email: [log in to unmask]
Department of Biochemistry [log in to unmask]
University of Cambridge Phone: +44 1223 766018 (office)
80 Tennis Court Road +44 7816 338275 (mobile)
Old Addenbrooke's Site +44 1223 364613 (home)
Cambridge CB2 1GA WWWeb: http://www.bio.cam.ac.uk/~tjs23
United Kingdom http://www.ccpn.ac.uk
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