Dear Christoph,
If you used multiple instances of "Deformations" to warp your images,
you will have to select all "Deformations" warped image outputs for
smoothing. Otherwise, only the output of one of the "Deformations"
instances will be smoothed.
If this does not solve your problem, can you please attach the entire
job (a .m file would be great) and the full log of your job output in
the command window?
Best,
Volkmar
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