Hi,
Yes, there is something wrong here. The --volume option requires
a number (the number of voxels in the mask) as the value, not
a filename.
All the best,
Mark
On 25 Oct 2010, at 16:08, Hongyu Yang wrote:
> Hello List,
>
> I am trying to get activated cluster size for caudate, insula, and
> other anatomical areas using my fMRI results. I typed in the scripts
> below:
> cluster --in=/r/d0/.../zstat1.nii.gz --thresh=0.95 --zthresh=2.3 --
> mm --volume=/r/d0/.../Left.Caudate.nii.gz
>
> However, I got this response from the terminal:
> --volume: Couldn't set_value! valstr="/r/d0/hyang/
> Left.Caudate.nii.gz"!
>
> Is there something wrong with my commands? I really appreciate your
> help.
>
> Thanks,
> Hongyu Yang
> Psychiatry Department,
> UT Southwestern Medical Center
> Dallas, TX 75248
>
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