Hi everyone,
I got an error with registration when running FEAT:
Registration
/bin/mkdir -p reg
/Applications/fsl/bin/fslmaths /Network/Servers/wicnserv.ad.bangor.ac.uk/Volumes/HOMES/MRIClass0910/pepa23/data/T1W_07mm_301/20100708_112100IM-0001-0001T1W07mmSENSEdevelopment08072010s301a1003 highres
/Applications/fsl/bin/flirt -ref highres -in example_func -out example_func2highres -omat example_func2highres.mat -cost corratio -dof 7 -searchrx -90 90 -searchry -90 90 -searchrz -90 90 -interp trilinear
** ERROR (nifti_image_read): failed to find header file for 'example_func'
** ERROR: nifti_image_open(example_func): bad header info
Error: failed to open file example_func
ERROR: Could not open image example_func
Image Exception : #22 :: Failed to read volume example_func
terminate called after throwing an instance of 'RBD_COMMON::BaseException'
/Applications/fsl/bin/convert_xfm -inverse -omat highres2example_func.mat example_func2highres.mat
Could not open matrix file example_func2highres.mat
Cannot read input-matrix
/Applications/fsl/bin/slicer example_func2highres highres -s 2 -x 0.35 sla.png -x 0.45 slb.png -x 0.55 slc.png -x 0.65 sld.png -y 0.35 sle.png -y 0.45 slf.png -y 0.55 slg.png -y 0.65 slh.png -z 0.35 sli.png -z 0.45 slj.png -z 0.55 slk.png -z 0.65 sll.png ; /Applications/fsl/bin/pngappend sla.png + slb.png + slc.png + sld.png + sle.png + slf.png + slg.png + slh.png + sli.png + slj.png + slk.png + sll.png example_func2highres1.png ; /Applications/fsl/bin/slicer highres example_func2highres -s 2 -x 0.35 sla.png -x 0.45 slb.png -x 0.55 slc.png -x 0.65 sld.png -y 0.35 sle.png -y 0.45 slf.png -y 0.55 slg.png -y 0.65 slh.png -z 0.35 sli.png -z 0.45 slj.png -z 0.55 slk.png -z 0.65 sll.png ; /Applications/fsl/bin/pngappend sla.png + slb.png + slc.png + sld.png + sle.png + slf.png + slg.png + slh.png + sli.png + slj.png + slk.png + sll.png example_func2highres2.png ; /Applications/fsl/bin/pngappend example_func2highres1.png - example_func2highres2.png example_func2highres.png; /bin/rm -f sl?.png
** ERROR (nifti_image_read): failed to find header file for 'example_func2highres'
** ERROR: nifti_image_open(example_func2highres): bad header info
Error: failed to open file example_func2highres
ERROR: Could not open image example_func2highres
Image Exception : #22 :: Failed to read volume example_func2highres
terminate called after throwing an instance of 'RBD_COMMON::BaseException'
sh: line 1: 16844 Abort trap /Applications/fsl/bin/slicer example_func2highres highres -s 2 -x 0.35 sla.png -x 0.45 slb.png -x 0.55 slc.png -x 0.65 sld.png -y 0.35 sle.png -y 0.45 slf.png -y 0.55 slg.png -y 0.65 slh.png -z 0.35 sli.png -z 0.45 slj.png -z 0.55 slk.png -z 0.65 sll.png
Cannot open sla.png for reading
** ERROR (nifti_image_read): failed to find header file for 'example_func2highres'
** ERROR: nifti_image_open(example_func2highres): bad header info
Error: failed to open file example_func2highres
ERROR: Could not open image example_func2highres
Image Exception : #22 :: Failed to read volume example_func2highres
terminate called after throwing an instance of 'RBD_COMMON::BaseException'
sh: line 1: 16846 Abort trap /Applications/fsl/bin/slicer highres example_func2highres -s 2 -x 0.35 sla.png -x 0.45 slb.png -x 0.55 slc.png -x 0.65 sld.png -y 0.35 sle.png -y 0.45 slf.png -y 0.55 slg.png -y 0.65 slh.png -z 0.35 sli.png -z 0.45 slj.png -z 0.55 slk.png -z 0.65 sll.png
Cannot open sla.png for reading
Cannot open example_func2highres1.png for reading
could any one help please?
thanks a lot
dan dan
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