You could feed *both* maps through mapmask with AXIS X Y Z to convert
them to the same axis order.
You may also have a problem with the maps having different XYZLIM
ranges. In that case, using XYZLIM MATCH on the second run of mapmask to
match the second map to the first should fix it.
Kevin
Hailiang Zhang wrote:
> Hi there,
>
> I was generating the atomic mask using ccpr-sfall, and generating real
> maps using ccp4-fft, and then ccp4-overlap these maps to calculate the cc
> values. However, ccp4-overlapmap frequently complaints that the
> "Fast,medium,slow axis do not match" for these maps. Following are the
> script I was using, and thanks for any advice (I can't manually change the
> keywords values one by one since everything needs automated):
>
> ************************************
> sfall xyzin ${OUTTMPDIR}${PDB}-Bsmall-0B.pdb \
> mapout ${OUTTMPDIR}${PDB}-Bsmall-mask.map \
> << END-sfall
> TITL Toxd Atom map from final coordinates
> MODE ATMMAP RESMOD
> GRID ${GRID}
> SYMM ${spcgrp}
> FORM NGAU 5
> END
> END-sfall
>
> ...
>
>
>
> fft >${OUTLOGDIR}${PDB}"-0B-fft.log" \
> hklin ${OUTTMPDIR}${PDB}-0B.mtz \
> mapout ${OUTTMPDIR}${PDB}-0B.map \
> << END-fft
> TITL data_toxd
> GRID ${GRID}
> XYZLIM ASU
> RESO 100.0 ${resolution}
> LABI F1=FOBS PHI=PHIFMODEL
> END
> END-fft
> *********************
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