Dear all,
I have a number of images that are in RL order (radiological) storage
order (and the NifTI header reflects this)
> [amw71]$ fslhd ANATOMY-2/3D_FSPGR_COR/897911.nii.gz | grep "to-"
> qform_xorient Right-to-Left
> qform_yorient Superior-to-Inferior
> qform_zorient Posterior-to-Anterior
> sform_xorient Right-to-Left
> sform_yorient Superior-to-Inferior
> sform_zorient Posterior-to-Anterior
I used a command to change the storage order to RL, which used to work
(as far as I can tell) but now gives an error message:
> [amw71]$ fslswapdim ANATOMY-2/3D_FSPGR_COR/897911.nii.gz LR PA IS
> test.nii.gz
> Cannot perform requested swap (NEUROLOGICAL/RADIOLOGICAL storage inverted)
> Try the following command instead:
> fslswapdim ANATOMY-2/3D_FSPGR_COR/897911.nii.gz RL PA IS test.nii.gz
So fslswapdim tells me to use a command that would not change anything
at all!
Is there another better/newer/older command that I should use instead?
Thanks,
Alle Meije
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