Hi Andreas,
I installed MELODIC v3.09 and there is no such an option as 'rtfm'.
Neither can I find this option by melodic --help. Also what does this
option mean: 'temporal concatenation' or 'tensorial ICA'?
Please kindly advise which version of melodic you use.
Best,
Leo
On Wed, Mar 31, 2010 at 10:55 PM, Andreas Bartsch
<[log in to unmask]> wrote:
> Hi,
> sure - rtfm!
> See
> melodic --help
> to get the usage.
> Cheers,
> Andreas
>
> ________________________________________
> Von: FSL - FMRIB's Software Library [[log in to unmask]] im Auftrag von Yiou Li [[log in to unmask]]
> Gesendet: Donnerstag, 1. April 2010 02:13
> An: [log in to unmask]
> Betreff: Re: [FSL] AW: [FSL] About registration in group analysis by MELODIC & About automating the data input for group analysis using MELODIC
>
> Hi Andreas,
>
> Thanks for your note.
>
> One more question: is there an option in the melodic command that
> specifies whether "temporal concatenation" or "tensorial ICA" is used?
>
> Best,
> Leo
>
>
> On Wed, Mar 31, 2010 at 3:05 PM, Andreas Bartsch
> <[log in to unmask]> wrote:
>> hi,
>> but this is absolutely flexible. running it from command line does not perform any registration, you just need to take care of it before!
>> cheers-
>> andreas
>>
>> ________________________________________
>> Von: FSL - FMRIB's Software Library [[log in to unmask]] im Auftrag von Yiou Li [[log in to unmask]]
>> Gesendet: Mittwoch, 31. März 2010 23:18
>> An: [log in to unmask]
>> Betreff: Re: [FSL] About registration in group analysis by MELODIC & About automating the data input for group analysis using MELODIC
>>
>> Hi Mikael,
>>
>> Thanks for your answer. I went through the options by $ melodic
>> --help but couldn't find any option to turn off the image
>> registration. Since I will perform a group analysis of 40 subjects, it
>> will take a long time (w/o grid computing) on the preprocessing. I
>> just want to save the time since I've done the preprocessing
>> separately.
>>
>> I would suggest, maybe in the next release, such option can be added
>> to MELODIC to make it more flexible -- just an idea.
>>
>> Best,
>> Leo
>>
>>
>> 2010/3/31 Mikaël Naveau <[log in to unmask]>:
>>> Hi Leo,
>>>
>>> You could use melodic command line tool on your preprocess dataset.
>>> $ melodic --help
>>> You'll find more accessible option than GUI.
>>> melodic accept text file with list of fMRI data as input and you can turn
>>> off some preprocessing options.
>>>
>>> hth
>>>
>>> Mikaël
>>>
>>> Yiou Li a wrote
>>>>
>>>> Dear all,
>>>>
>>>> I found it is impossible to turn of the registration option in MELODIC
>>>> when performing group analysis on multiple datasets. Since I have
>>>> already had all the datasets registered using a separate program, can
>>>> I input those registrated datasets to MELODIC and turn off the
>>>> registration within MELODIC?
>>>>
>>>> Your advise is appreciated!
>>>>
>>>> Best,
>>>> Leo
>>>>
>>>>
>>>>
>>>
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