Dear FSL users and developers:
I have run TBSS using the procedure given in the FSL website, comparing a
sample of 15 patients and 9 controls. The findings are interesting, but
given their distribution it is difficult to fully appreciate their extent
without looking at the results using the FSL program itself.
As a result, I am trying to find the best way to describe what I see on
paper (i.e. manuscript), and would greatly appreciate any input on the
following questions:
1. Is there any way to use the cluster program (or any other program in
FSL) to capture both MNI coordinates and corresponding mean FA values (for
patient and control groups) of ALL voxels that are significantly different
between the compared groups?
2. Can a report be generated listing the total count of significantly
different voxels for each involved white matter structure, as identified by
the voxels’ MNI coordinates and corresponding labels in the JHU White-Matter
Tractography Atlas?
3. Can mean FA also be calculated (for patient and control groups) for
these significantly different voxels grouped by white matter structure?
I apologize if this message was sent in duplicate. Please let me know if
further clarification is needed on any of the above. Thank you all in
advance for your kind assistance.
Regards,
Roger
Roger J. Jou, MD
Postdoctoral Fellow
Child Neuroscience Laboratory
Child Study Center
Yale University School of Medicine
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