JiscMail Logo
Email discussion lists for the UK Education and Research communities

Help for GRIDPP-STORAGE Archives


GRIDPP-STORAGE Archives

GRIDPP-STORAGE Archives


GRIDPP-STORAGE@JISCMAIL.AC.UK


View:

Message:

[

First

|

Previous

|

Next

|

Last

]

By Topic:

[

First

|

Previous

|

Next

|

Last

]

By Author:

[

First

|

Previous

|

Next

|

Last

]

Font:

Proportional Font

LISTSERV Archives

LISTSERV Archives

GRIDPP-STORAGE Home

GRIDPP-STORAGE Home

GRIDPP-STORAGE  February 2010

GRIDPP-STORAGE February 2010

Options

Subscribe or Unsubscribe

Subscribe or Unsubscribe

Log In

Log In

Get Password

Get Password

Subject:

Re: ATLAS AOD file access

From:

"Christopher J.Walker" <[log in to unmask]>

Reply-To:

Christopher J.Walker

Date:

Mon, 22 Feb 2010 18:57:11 +0000

Content-Type:

text/plain

Parts/Attachments:

Parts/Attachments

text/plain (122 lines)

Wahid Bhimji wrote:
> Hi,
> 
> I agree that  a hammercloud test with "official" files from ATLAS is 
> something that will be needed and, in some senses, this is speculation 
> of what that might show.

Indeed.

> 
> But, I am not entirely sure it would be that transparent - for one thing 
> it masks effects by testing several things at the same time.

Yes, this is the problem with hammercloud tests. They are great in that 
they stress a site and provide an overall picture of how well the site 
performs. What they don't do is allow you to quickly and reliably test 
small changes on their own to see if they have an effect.

There are various things that we might do on our disk servers (adding 
RAM for example) that might make a difference at the 10-20% level. 
Several of these improvements would be worth having - but we'd want a 
more repeatable test to be able to be sure we'd improved things. One of 
our vendors has suggested some improvements we could make - and asked if 
they improved things. It is rather embarrassing to admit that it's 
really important to us, but we aren't actually able to measure the 
performance increase with a realistic workload.

> For a second thing while hammerclouds do use real user analysis code - 
> your site may get visited by an user/ analysis group that does something 
> much stupider.
> 

Having a range of tests is indeed useful - in fact I asked about a local 
hammercloud test - but there doesn't seem to be effort available to 
provide one.

> In some ways there are benefits in having a range of tests.
> - "raw" file access like in chris W's tests
> - root file access like my jobs
> - local athena jobs
> - hammercloud

Completely agreed.

By measuring the performance of the individual stages, we can work out 
where the problems are, and what the lowest hanging fruit are.

The impression I get, by the way, is that the UK is ahead of the game in 
actually doing real measurements on this.

Chris

> One Q - was the athena job you are submitting local - or through ganga etc?
> If local - can you send me the joboptions file so I can just compare.
> 
> Cheers
> 
> Wahid
> 
> John Bland wrote:
>> Hi,
>>
>> My tests are performed with a sample athena job provided by the Atlas 
>> researchers. Maybe this is why I see (possibly) different results for 
>> RFIO.
>>
>> I concur with others that a widespread hammercloud test is really 
>> needed to test these things fairly (and without duplicating effort too 
>> much).
>>
>> John
>>
>> On 22/02/2010 13:15, Wahid Bhimji wrote:
>>> Hello
>>>
>>> On TTreeCache: I also tried this out but independently to the reordering
>>> (so the improvements I saw were from reordering, though TTreeCache can
>>> also provide an improvement.)
>>> This only seemed to work for reading a local file, with RFIO it seemed
>>> to cause a segfault after reading 2GB.
>>> The plot of the access pattern is on the web page with the rest and how
>>> to use it in Root are in the example on the wiki page. I'm not sure
>>> whether it is yet possible to use it in Athena jobs though.
>>>
>>> On reordered merged files: If you want you can copy my reordered file
>>> (it is a biggy)
>>> lcg-cp -v
>>> srm://srm.glite.ecdf.ed.ac.uk/dpm/ecdf.ed.ac.uk/home/atlas/atlasscratchdisk/AODClone.root 
>>>
>>> scratch0/AODClone.root
>>> (If you are not in the atlas VO, I can copy it to dteam )
>>>
>>> Wahid
>>>
>>> John Bland wrote:
>>>> On 22/02/2010 11:53, Christopher J.Walker wrote:
>>>>> John Bland wrote:
>>>>>
>>>>>> This is assuming that what I've been provided with by the local ATLAS
>>>>>> guys *is* actually ordered ;0). I've already had one set that wasn't.
>>>>>> I'm about to try the local disk tests to see if they show the same
>>>>>> effect as Wahid's.
>>>>>>
>>>>>
>>>>> At the same time as the effect of ordered data, something called Ttree
>>>>> cache was talked about. Are you using this too? I can see that it 
>>>>> might
>>>>> make a difference, though this is clutching at straws a bit.
>>>>
>>>> They're only ordered but I haven't had time to do any more tests,
>>>> particularly as the files I've got are unmerged so it's hard to give a
>>>> fair comparison when cached locally.
>>>>
>>>> John
>>>>
>>>
>>>
>>
>>
> 
> 

Top of Message | Previous Page | Permalink

JiscMail Tools


RSS Feeds and Sharing


Advanced Options


Archives

April 2024
March 2024
February 2024
January 2024
December 2023
November 2023
October 2023
September 2023
August 2023
July 2023
June 2023
May 2023
April 2023
March 2023
February 2023
January 2023
December 2022
November 2022
October 2022
September 2022
August 2022
July 2022
June 2022
May 2022
April 2022
March 2022
February 2022
January 2022
December 2021
November 2021
October 2021
September 2021
August 2021
July 2021
June 2021
May 2021
April 2021
March 2021
February 2021
January 2021
December 2020
November 2020
October 2020
September 2020
August 2020
July 2020
June 2020
May 2020
April 2020
March 2020
February 2020
January 2020
December 2019
November 2019
October 2019
September 2019
August 2019
July 2019
June 2019
May 2019
April 2019
March 2019
February 2019
January 2019
December 2018
November 2018
October 2018
September 2018
August 2018
July 2018
June 2018
May 2018
April 2018
March 2018
February 2018
January 2018
December 2017
November 2017
October 2017
September 2017
August 2017
July 2017
June 2017
May 2017
April 2017
March 2017
February 2017
January 2017
December 2016
November 2016
October 2016
September 2016
August 2016
July 2016
June 2016
May 2016
April 2016
March 2016
February 2016
January 2016
December 2015
November 2015
October 2015
September 2015
August 2015
July 2015
June 2015
May 2015
April 2015
March 2015
February 2015
January 2015
December 2014
November 2014
October 2014
September 2014
August 2014
July 2014
June 2014
May 2014
April 2014
March 2014
February 2014
January 2014
December 2013
November 2013
October 2013
September 2013
August 2013
July 2013
June 2013
May 2013
April 2013
March 2013
February 2013
January 2013
December 2012
November 2012
October 2012
September 2012
August 2012
July 2012
June 2012
May 2012
April 2012
March 2012
February 2012
January 2012
December 2011
November 2011
October 2011
September 2011
August 2011
July 2011
June 2011
May 2011
April 2011
March 2011
February 2011
January 2011
December 2010
November 2010
October 2010
September 2010
August 2010
July 2010
June 2010
May 2010
April 2010
March 2010
February 2010
January 2010
December 2009
November 2009
October 2009
September 2009
August 2009
July 2009
June 2009
May 2009
April 2009
March 2009
February 2009
January 2009
December 2008
November 2008
October 2008
September 2008
August 2008
July 2008
June 2008
May 2008
April 2008
March 2008
February 2008
January 2008
December 2007
November 2007
October 2007
September 2007
August 2007
July 2007
June 2007
May 2007
April 2007
March 2007
February 2007
January 2007
December 2006
November 2006
October 2006
September 2006
August 2006
July 2006
June 2006
May 2006
April 2006
March 2006
February 2006
January 2006
December 2005
November 2005
October 2005
September 2005
August 2005
July 2005
June 2005
May 2005
April 2005
March 2005
February 2005
January 2005
December 2004
November 2004
October 2004
September 2004
August 2004
July 2004
June 2004


JiscMail is a Jisc service.

View our service policies at https://www.jiscmail.ac.uk/policyandsecurity/ and Jisc's privacy policy at https://www.jisc.ac.uk/website/privacy-notice

For help and support help@jisc.ac.uk

Secured by F-Secure Anti-Virus CataList Email List Search Powered by the LISTSERV Email List Manager