I'm running the most up to date FSL on both a 32 bit Ubuntu 9.04 system and a
64 bit Mac OSX system and I am getting different results when I run first_flirt on
the same image.
It seems as though for most images there is only a small difference, but I've run
into an issue where there is a very large difference in registration after performing
the second (subcortical) registration in first_flirt.
Is there some inherent difference between the Mac FSL build and the Ubuntu that
would be causing this? Or is there some other problem?
Thanks,
Dave
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