Dear Saad and lists,
We would like to use the older versions for the diffusion study which
is currently under analyses.
(until 4.1.2 the termination mask had a different definition; 4.1.4
and 4.1.5 had different calculation in bedpostx for higher b value)
We have just got a new linux machine and I wonder if we could download
the older versions (4.1.2, 4.1.4 CentOSv5.4 64bit) so that we could
switch using the different versions by just changing the setup files
(e.g. bashrc; folder names fslv412, fslv414, fslv415).
I would appreciate if you could tell me where to get these old
versions. I went to http://fsl.fmrib.ox.ac.uk/fsldownloads/
oldversions/, but I could not find fsl-4.1xxx.tar.gz.
Many thanks in advance.
Riki
--------------------
Riki Matsumoto M.D., Ph.D.
Department of Neurology
Kyoto University Graduate School of Medicine
Shogoin, Sakyo, Kyoto, JAPAN 606-8507
Tel: +81-(0)75-751-3772
Fax:+81-(0)75-751-9416 (for large transfer, use +81-(0)75-761-9780)
--------------------
On 2010/01/24, at 21:47, Saad Jbabdi wrote:
> Hi
> Yes, everything is compatible.
> There might be slight differences in the distributions calculated by
> bedpostx - these differences will be higher with noisier data
> (higher b-value, smaller voxels, etc.) - so to be safe, I wouldn't
> mix both versions of bedpostx to study the same group of subjects.
>
> Saad.
>
>
>
> On 24 Jan 2010, at 08:20, Jiří Keller, M.D. wrote:
>
>> Hello,
>> just to be sure - are the results backward-compatible ? As it was not
>> in one of the older upgrades and bedpostx needed to be run again. I
>> just need to be on the safe side with my older data ... It seems to
>> be
>> OK from what I hear, but can someone from FMRIB confirm it ?
>> George
>>
>> 2010/1/22 Matthew Webster <[log in to unmask]>:
>>> Hi,
>>> The 4.1.5 patch has been released:
>>>
>>> This is mainly a collections of minor improvements and bug-fixes,
>>> including:
>>> An issue with Randomise "pausing" has been fixed.
>>> The Posterior Insula has been added to the Juelich cyto-
>>> architectonic atlas,
>>> courtesy of Simon Eickhoff.
>>> There are some improvements to the bedpostx monitor script.
>>> Large speedup for invwarp by automatically adjusting the useful FOV
>>> internally (no cropping of the original images needed).
>>>
>>> The full distribution can be downloaded from
>>> http://www.fmrib.ox.ac.uk/fsldownloads/
>>> while incremental patches from 4.1.4 and 4.1.x can be downloaded
>>> from
>>> http://www.fmrib.ox.ac.uk/fsldownloads/patches
>>>
>>>
>>>
>>
>
> --
> Saad Jbabdi
> University of Oxford, FMRIB Centre
>
> JR Hospital, Headington, OX3 9DU, UK
> (+44)1865-222466 (fax 717)
> www.fmrib.ox.ac.uk/~saad
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