Dear Josep,
Can you type the following command for that subject directory: ls -l
tract.bedpostX
Saad.
On 14 Dec 2009, at 09:51, Josep Marco Pallarés wrote:
> Dear colleagues,
>
> I am analyzing DTI data with FDT in order to make probabilistic
> tractography
> in some data. Everything has apparently worked correctly (Eddy
> correction,
> DTIFIT and BECPOSTX) until the last step (Registration). After Bet
> extraction of my structural data, I try to make the Registration but
> I get
> the following message:
>
> Errors: ** ERROR (nifti_image_read): failed to find header file for
> '$Dir_subject/tract.bedpostX/nodif_brain'
>
> ** ERROR:
> nifti_image_open ('$Dir_subject/tract.bedpostX/nodif_brain'): bad
> header info
> Error: failed to open file $Dir_subject/tract.bedpostX/nodif_brain
>
> However the image is there, I can read it and, i.e., open it with
> FSLView.
>
> Could you please indicate me what could be the problem?
>
> Thank you very much for your help. Best Regards,
>
> Josep Marco Pallarés
> Dep Basic Psychology
> University of Barcelona
>
--
Saad Jbabdi
University of Oxford, FMRIB Centre
JR Hospital, Headington, OX3 9DU, UK
+44 (0) 1865 222466 (fax 717)
www.fmrib.ox.ac.uk/~saad
|