Hi FSL,
I can't seem to obtain a resulting image when running possum on default
parameters. The following is what appears :
---------------------------------------------------------------------------
Starting POSSUM...
Creating the POSSUM directory...
Generating the pulse sequence...
Regular EPI. 100 % coverage
/usr/local/fsl/bin/pulse -i /usr/local/fsl/data/possum/brain.nii.gz -
o /home/fsl/simdir/pulse --te=0.030 --tr=3 --trslc=3.0 --nx=64 --ny=64 --
dx=0.004 --dy=0.004 --maxG=0.055 --riset=0.00022 --bw=100000 --
numvol=1 --numslc=1 --slcthk=0.001 --zstart=0.07 --seq=epi --slcdir=z+ --
readdir=x+ --phasedir=y+ --gap=3e-06 -v --cover=100 --angle=90
>> /home/fsl/simdir/possum.log 2>&1
Submitting the job...
/usr/local/fsl/bin/possumX /home/fsl/simdir -n 1 -t 2
>> /home/fsl/simdir/possum.log 2>&1
Job submitted.
You can follow the POSSUM process by looking at the possum.log file.
If you want to see the individual processes see the logs directory.
---------------------------------------------------------------------------
The process seems to stop at the above point and I can't see a resulting
image file.
Any feedaback will be much appreciated.
Thanks,
Dinesh
|