Am getting the following error on while running Melodic? Anyone? Thanks !
/bin/mkdir -p reg
/Applications/fsl/bin/fslmaths /Applications/fsl/data/standard/MNI152_T1_2mm_brain
standard
/Applications/fsl/bin/flirt -ref standard -in example_func -out example_func2standard -
omat example_func2standard.mat -cost corratio -dof 12 -searchrx -90 90 -searchry -90
90 -searchrz -90 90 -interp trilinear
** ERROR (nifti_image_read): failed to find header file for 'example_func'
** ERROR: nifti_image_open(example_func): bad header info
Error: failed to open file example_func
ERROR: Could not open image example_func
Image Exception : #22 :: Failed to read volume example_func
terminate called after throwing an instance of 'RBD_COMMON::BaseException'
/Applications/fsl/bin/convert_xfm -inverse -omat standard2example_func.mat
example_func2standard.mat
Could not open matrix file example_func2standard.mat
Cannot read input-matrix
/Applications/fsl/bin/slicer example_func2standard standard -s 2 -x 0.35 sla.png -x 0.45
slb.png -x 0.55 slc.png -x 0.65 sld.png -y 0.35 sle.png -y 0.45 slf.png -y 0.55 slg.png -y
0.65 slh.png -z 0.35 sli.png -z 0.45 slj.png -z 0.55 slk.png -z 0.65 sll.png ;
/Applications/fsl/bin/pngappend sla.png + slb.png + slc.png + sld.png + sle.png + slf.png
+ slg.png + slh.png + sli.png + slj.png + slk.png + sll.png example_func2standard1.png
; /Applications/fsl/bin/slicer standard example_func2standard -s 2 -x 0.35 sla.png -x 0.45
slb.png -x 0.55 slc.png -x 0.65 sld.png -y 0.35 sle.png -y 0.45 slf.png -y 0.55 slg.png -y
0.65 slh.png -z 0.35 sli.png -z 0.45 slj.png -z 0.55 slk.png -z 0.65 sll.png ;
/Applications/fsl/bin/pngappend sla.png + slb.png + slc.png + sld.png + sle.png + slf.png
+ slg.png + slh.png + sli.png + slj.png + slk.png + sll.png example_func2standard2.png
; /Applications/fsl/bin/pngappend example_func2standard1.png -
example_func2standard2.png example_func2standard.png; /bin/rm -f sl?.png
** ERROR (nifti_image_read): failed to find header file for 'example_func2standard'
** ERROR: nifti_image_open(example_func2standard): bad header info
Error: failed to open file example_func2standard
ERROR: Could not open image example_func2standard
Image Exception : #22 :: Failed to read volume example_func2standard
terminate called after throwing an instance of 'RBD_COMMON::BaseException'
sh: line 1: 12320 Abort trap /Applications/fsl/bin/slicer example_func2standard
standard -s 2 -x 0.35 sla.png -x 0.45 slb.png -x 0.55 slc.png -x 0.65 sld.png -y 0.35
sle.png -y 0.45 slf.png -y 0.55 slg.png -y 0.65 slh.png -z 0.35 sli.png -z 0.45 slj.png -z
0.55 slk.png -z 0.65 sll.png
Cannot open sla.png for reading
** ERROR (nifti_image_read): failed to find header file for 'example_func2standard'
** ERROR: nifti_image_open(example_func2standard): bad header info
Error: failed to open file example_func2standard
ERROR: Could not open image example_func2standard
Image Exception : #22 :: Failed to read volume example_func2standard
terminate called after throwing an instance of 'RBD_COMMON::BaseException'
sh: line 1: 12322 Abort trap /Applications/fsl/bin/slicer standard
example_func2standard -s 2 -x 0.35 sla.png -x 0.45 slb.png -x 0.55 slc.png -x 0.65
sld.png -y 0.35 sle.png -y 0.45 slf.png -y 0.55 slg.png -y 0.65 slh.png -z 0.35 sli.png -z
0.45 slj.png -z 0.55 slk.png -z 0.65 sll.png
Cannot open sla.png for reading
Cannot open example_func2standard1.png for reading
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