Hi, I want to get subjects intracranial volume. So I search some related
message in this archive and get some procedure about it. Procedure just likes
below:
1. using bet command: bet E03.nii.gz E03_brain.nii.gz -f 0.4 -g 0
2.avwstats E03_brain.nii.gz -V
At step 2, the error showed up and said no such command (I use FSL 4.1.4
version). So I don't know how to get the intracranial volume in this way?
By the way,
1.when I use fslview tool to see E03_brain.nii.gz file, I find some neck tissue
still in image. If the avwstats command can work, those tissues (eg: neck)
volume will include in intracranial volume result?
2. How to edit bet command to reject neck tissue completely?
Thank you very much!!!
yours sincerely:
Hankee
|