Yes, but is it *different*?!?
Mark
On 11 Nov 2009, at 17:06, Shal Hat wrote:
> yeah it is actually upside down before BET..
>
> On Wed, Nov 11, 2009 at 11:53 AM, Mark Jenkinson
> <[log in to unmask]> wrote:
> Hi,
>
> You haven't answered my original question:
>
> Is the orientation different *after* BET than it is *before* BET??
>
> All the best,
> Mark
>
>
>
>
> On 11 Nov 2009, at 16:47, Shal Hat wrote:
>
> Thanks,, is their a way to do the reorientation using the GUI? If
> not, what should the inputs x,y,z be for the fslswapdim command ?
> Again, I acquired
> the slices in a sagital direction.
>
> Thanks,
>
>
>
> On Wed, Nov 11, 2009 at 10:42 AM, Ignacio Letelier <[log in to unmask]
> > wrote:
>
>
> 2009/11/11 *Shal Hat* <[log in to unmask]>
>
> Hi
>
> Before doing BET, I use the dcm2niigui.ex software to reorient the
> images in an orthogonoal view. I am not sure if this option does
> exists in fsl, but sure what I'm telling you will work.
>
> best regards.
>
>
>
> --
> Ignacio Letelier Aguirre.
> Estudiante Ingeniería Civil Biomédica
> Universidad de Valparaíso, Viña del Mar.
> Teléfono: 97139955
>
>
>
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