Paul,
Thank you for the mail. It is indeed a problem in the PDB format,
generated at the Yale server. The segID was wrong and the atom type was
missing.
After the correction, however, I am still struggling with the animation
functions in ccp4mg....
Zhongren
-----Original Message-----
From: Mailing list for users of COOT Crystallographic Software
[mailto:[log in to unmask]] On Behalf Of Paul Emsley
Sent: Monday, September 07, 2009 5:04 AM
To: [log in to unmask]
Subject: Re: ccp4mg
Wu, Zhongren wrote:
> I am using ccp4mg to get nice graphics for presentations. I have no
> problems to get movie.gif files for structure rotations. However,
> when use animation, I ran into a lot problems. I followed the
> instructions closely and get morph files (pdb format) from the
> yale.edu server. But ccp4mg refuses to take them, complaining the
> wrong format. I hope somebody can help me out.
>
Hello Zhongren Wu,
If ccp4mg complains about the format of the PDB file(s) it is probably
right. The devil is in the detail - what does it say? If I had to
guess, I'd say that the files from they yale.edu are not sanctioned PDB
format.
Paul.
p.s. slightly ironic that you should ask about ccp4mg here. There is a
mailing list for ccp4mg questions:
https://www.jiscmail.ac.uk/cgi-bin/webadmin?A0=CCP4MG
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