Hi Raja,
On Wed, 16 Sep 2009 16:57:18 -0700, Raja Dey <[log in to unmask]> wrote:
> Hi,
> I am getting a problem to prepare a figure in PYMOL. I have 4 nearly
> identical monomers in the AU sitting at the corners of a rectangle. The 2
> front monomers almost perfectly superimpose on the back 2 when I am looking
> along the plane. I can see this view in O program. For some reason I could
> not make this view in PYMOL. It looks off in PYMOL. Front 2 looks widely
> separated and back 2 looks colser at this orientation in PYMOL. Does anyone
> have any idea? I tried centering at many position, but the problem remains.
> Looking forward to your suggestion.
It sounds like you are seeing the effects of perspective. Try setting the
display mode to "Orthoscopic" (under the "Display" main menu).
Cheers,
Rob
--
Robert L. Campbell, Ph.D.
Senior Research Associate/Adjunct Assistant Professor
Botterell Hall Rm 644
Department of Biochemistry, Queen's University,
Kingston, ON K7L 3N6 Canada
Tel: 613-533-6821 Fax: 613-533-2497
<[log in to unmask]> http://pldserver1.biochem.queensu.ca/~rlc
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