Great news! Thank you!
On 8/13/09 5:21 PM, "Gwenaëlle DOUAUD" <[log in to unmask]> wrote:
> Hi Aga,
> you just need to name your successful brain extractions "*_struc_brain.nii"
> (none of the mask, skull and cut images are used in the following).
> --- En date de : Jeu 13.8.09, Agnieszka Burzynska
> <[log in to unmask]> a écrit :
>> De: Agnieszka Burzynska <[log in to unmask]>
>> Objet: [FSL] Fslbvm_1_bet: can I use brain-extracted images from other
>> À: [log in to unmask]
>> Date: Jeudi 13 Août 2009, 16h08
>> Dear all,
>> After running fslvbm_1_bet I see that bet didnt work for
>> some subjects (neck
>> is still included), even if I added some other options
>> after -N.
>> I have brain-extracted T1 images of these subjects from
>> another analysis.
>> Could I just replace the unscucessful vbm-bet images with
>> these images,
>> giving them fsl-vbm-related names?
>> Do next steps of fsl-vbm use other files than
>> xx_struc_brain.nii (e.g.
>> xx_struc_brain_mask.nii, xx_struc_brain_skull.nii or
>> Knowing this would be very helpful!
>> Thank you,