At tbss_3_postreg step, all images (including the target) are affine-aligned
to MNI152. My question is if there is an option to use custom space (e.g. a
special atlas or simply an individual image) instead of MNI152 here. The
reason for doing this is that we are working with pre-term neonatal MRI and
a standard adult template such as MNI152 might not be appropriate. We also
work with rat MRI so apparently using MNI152 will result in funny results
(we actually have tried!).
BTW, I'm new to FSL and TBSS. I've searched the forum achieve but couldn't
find anything related.
Thanks in advance,