Hi - close - and sorry the Usage isn't clearer:
Yes you need the -i and --mix options to be set, as you have done -
but they are then ignored (as you probably guessed). Then you need to
add the report option and may as well add verbose:
-v --report
That should do the trick,
Cheers.
On 31 Jul 2009, at 12:36, Gael Varoquaux wrote:
> Hi,
>
> I would like to run the melodic mixture model on a set of maps I
> already
> have, and retrieve thresholded maps. I have tried running:
>
> melodic -i canica_ic.nii.gz --ICs=canica_ic --mix=melodic_mix -o
> melodic_mix
>
> but the software just sits there with 100% CPU and no memory used. The
> log file created is:
>
>
> Melodic Version 3.09
>
> melodic -i canica_ic.nii.gz --ICs=canica_ic --mix=melodic_mix -o
> melodic_mix
> ---------------------------------------------
>
> Melodic results will be in melodic_mix
>
> Reading data file canica_ic ... done
> Reading components canica_ic ... done
> Creating mask ... done
>
> Does anyone has an advice on what I am doing wrong? The data is
> skull-stripped ICA maps.
>
> Cheers,
>
> Gaël
>
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