Are you using parallel or serial processing? (i.e. is the SGE_ROOT
environment variable set?).
Can you use this script instead (on clean subject directories) and
tell me what happens?
On 18 Aug 2009, at 16:29, Laura Danielian wrote:
> I've received various versions of the following error after running
> on two sets of data:
> Errors: wc:
> /net/..../BEDPOSTX.bedpostX/commands.txt: No such file or directory
> /usr/local/fsl-latest/bin/bedpostx: line 220: 13349 Terminated
> On the first data set, the dyads were not created. On the second
> set, the
> bedpostX directory seems to be complete and the dyads look correct,
> probtrackX does not run properly on the data. In both cases, the
> data_slice_00* files are still in the original bedpost directory.
> ran without error.
> Your suggestions are appreciated. Thanks!
University of Oxford, FMRIB Centre
JR Hospital, Headington, OX3 9DU, UK
+44 (0) 1865 222523 (fax 717)