Earlier I posted that I didn't get any files using 4.1.4 from my error:
"Queuing post processing stage" with Terminal error but I was wrong I did get bedpostX
directory with what look have the same file names as the tutorial, although I have a few
extra (commands.txt, logs folder, monitor).
When I went to run "vecreg -i dyads1 -o dyads1_to_standard -r
$FSLDIR/data/standard/MNI152_T1_2mm -t xfms/diff2standard.mat"
I couldn't because in my xfms folder I only have an eye.mat and no others (i.e. in the
tutorial folder there is also diff2standard.mat, diff2str, standard2diff, standard2str etc).
Can I just copy the files from the tutorial xfms folder or is the bedpostx supposed to
generate these for each individual subject?
I've run 4 dti sessions and all 4 only have xmfs with eye.mat. 2 of the 4 had the
"queuing post processing stage" then Done! and 2 didn't.