Hi,
The setting "auto" simply means that it picks the best method for each
structure. At the moment this will be "fast" for most structures but
actually do "none" for Thalamus, Putamen and Pallidum as we've
seen better results, on average, with these choices.
Hope that helps.
All the best,
Mark
On 27 Jul 2009, at 17:35, David Lenar wrote:
> Hi,
>
> Looking at the notes for FIRST, when running "run_first_all," the
> default boundary correction method is "auto." I understand the fast
> and threshold methods of boundary correction, but I'm still unsure
> about the "auto" method. What are the optimal settings for each
> structure?
>
> Thanks,
> Dave
>
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