I had a similar problem with iMosflm, it ran nicely then crashed during
the integration stage. In the best possible traditions I then read the
instructions and added the following;
setenv MOSFLM_WISH /path/to/wish
setenv MOSFLM_EXEC /path/to/ipmosflm
setenv GFORTRAN_UNBUFFERED_ALL 1
The first two were already set but the latter really made the difference
and the program became stable. I don't know if this was luck or not but it
works for me so I'm sticking with it! I really like the new GUI (thanks
Luke and Harry).
Incidentally, I don't know if this is important or not but I'm using a 64
bit version of CCP4i, Mosflm and iMosflm running in Fedora 10 on a Lenovo
ThinkStation (highly recommended).
Cheers,
Eddie.
Edward Snell Ph.D.
Assistant Prof. Department of Structural Biology, SUNY Buffalo,
Hauptman-Woodward Medical Research Institute
700 Ellicott Street, Buffalo, NY 14203-1102
Phone: (716) 898 8631 Fax: (716) 898 8660
Email: [log in to unmask] Telepathy: 42.2 GHz
Heisenberg was probably here! "Crystals, how quaint".
> Is it the gui or mosflm itself that crashes? The new gui is dependent
> upon a number of external dependencies, so you are at the mercy of the
> stability of those. The old gui still works fine, at least last time I
> checked.
>
>
>
>
> On Thu, July 30, 2009 4:40 pm, Marius Schmidt wrote:
>> We have a little internal project
>> where we want to compare the quality of
>> data reduced with HKL2000 and
>> IMOSFLM (mosflm) to 1.3 A. Unfortunately, imosflm
>> with its standard settings crashes always
>> even at lower resolution whereas HKL2000
>> is rock stable.
>>
>> Why is that so? Any experience with that?
>>
>> Data collected at a synchrotron,
>> axis set to reversephi in imosflm
>> (newest release). Suse Linux,
>> Swap space 2 GB.
>>
>> Anyway, even if (i)mosflm looses
>> orientation, it should complain and
>> not crash.
>>
>> Thanks,
>> Marius
>>
>>
>> Dr.habil. Marius Schmidt
>> Asst. Professor
>> University of Wisconsin-Milwaukee
>> Department of Physics Room 454
>> 1900 E. Kenwood Blvd.
>> Milwaukee, WI 53211
>>
>> phone: +1-414-229-4338
>> email: [log in to unmask]
>> http://users.physik.tu-muenchen.de/marius/
>>
>
>
>
> William G. Scott
>
> Contact info:
> http://chemistry.ucsc.edu/~wgscott/
>
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