On Sat, 20 Jun 2009 09:37:07 +0100, Jesper Andersson <[log in to unmask]>
wrote:
>Dear Mara,
>
>> It looks like in these cases FNIRT has not finished. In the
>> registration
>> summary html page there are only images for "Registration of
>> example_func to
>> highres" and no images for
>>
>> Summary registration, FMRI to standard space
>> Registration of highres to standard
>> Registration of example_func to standard
>>
>> that are also usually included.
>>
>> I've attached the report_log.html - please let me know if you need
>> other
>> information.
>
>it does look from your log-file that things have ended prematurely.
>Are you sure this is related to the presence/absence of that warning?
>My guess is that it is not, and that if you had a look in the logs of
>some of the successful runs you would find warnings in some of those
>too.
>
>Did you run this as a batch, and if so would you have the error-log
>file from that? If not, could you please upload structural that you
>are trying to register and the pertinent .mat file from flirt
>(highres2standard.mat) and then mail me the reference number that you
>are given?
>
>Jesper
>
>
The only ones with error messages were run as a batch in parallel on a
multi-core machine and from looking at the dates on the files, it looks like
all three of them with the error terminated at the same time. When I reran
them, they were fine and did not generate the error again.
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