Hello List,
I am using SPM5 to preprocess/analyze my fMRI images. The following are the preprocessing steps I use:
1) realign (mean only)
2) slice timing (interleaved aquisition, TR = 2, no gap)
3) coregistration estimate T1 and mean functional
4) segmentation of T1
5) write normalize using parameters generated by segmentation
6) smooth using 6 6 6 kernel
Are the smoothed images in MNI or ICBM space?
Thank-you for yor help,
Julie
Julie E. McEntee, M.A., C.C.R.P.
Senior Research Program Coordinator
Department of Psychiatry- Neuroimaging
Johns Hopkins University School of Medicine
600 N. Wolfe St./ Phipps 300
Baltimore, MD 21287
Phone: 410-502-0468
Fax: 410-614-3676
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