Dear fsl experts,
i am using FIRST to segment the Hippocampus in a T1 dataset of 84
different volumes. In some cases FIRST does an excellent job and in
some cases it's just really awfully wrong - the position of the
hippocampus is getting estimated deep in white matter. I was wondering
how I could improve the results, e.g. Noise reduction of the original
T1 (maybe with SUSAN) or correct for intensity inhomogeneity how it is
done in FAST.
Or are these steps included in the FIRST script?
Thanks a lot, Michael
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