Grot is not empty and I re-run with latest patch. Still same error.
Upload number is 365518
Thanks so much,
Naama
On Feb 14, 2009, at 2:05 AM, Steve Smith wrote:
> Hi,
>
> Not sure what's going on here...make sure you have the latest FSL
> patch release as there was a fix in invwarp at some stage, and that
> 'grot' is not empty. If things still don't work you'd better upload
> the data for us to check.
>
> Cheers.
>
>
> On 13 Feb 2009, at 20:37, Naama Barnea-Goraly wrote:
>
>> Dear FSL team,
>>
>> I am running deproject in FSL4.1 and for
>>
>> tbss_deproject grot 2
>>
>> I get the following error:
>>
>> processing cont_13270_FA_FA:
>> /usr/local/fsl4-1/bin/tbss_deproject: line 117: 11855 Floating
>> point exception$FSLDIR/bin/invwarp -w $warp -o ${warp}_inv -r $g
>> /usr/local/fsl4-1/bin/tbss_deproject: line 117: 11856 Floating
>> point exception$FSLDIR/bin/applywarp -i $nextvol -o ../stats/${g}_$
>> {IN} -r $g -w ${warp}_inv --rel $preaffine -d float -s --super
>> level=a
>>
>>
>> Any advice would be greatly appreciated.
>>
>> Thanks,
>>
>> Naama
>>
>>
>>
>> Naama Barnea-Goraly M.D.
>> Instructor
>> Center for Interdisciplinary Brain Sciences Research
>> Stanford University Division of Child and Adolescent Psychiatry
>> 401 Quarry Rd. MC 5795
>> Stanford University School of Medicine
>> Stanford, CA 94305-5795
>> Phone: (650) 736-1874, fax: (650) 724-4794
>>
>>
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>>
>
>
> ---------------------------------------------------------------------------
> Stephen M. Smith, Professor of Biomedical Engineering
> Associate Director, Oxford University FMRIB Centre
>
> FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK
> +44 (0) 1865 222726 (fax 222717)
> [log in to unmask] http://www.fmrib.ox.ac.uk/~steve
> ---------------------------------------------------------------------------
Naama Barnea-Goraly M.D.
Instructor
Center for Interdisciplinary Brain Sciences Research
Stanford University Division of Child and Adolescent Psychiatry
401 Quarry Rd. MC 5795
Stanford University School of Medicine
Stanford, CA 94305-5795
Phone: (650) 736-1874, fax: (650) 724-4794
CONFIDENTIALITY NOTICE: This e-mail communication and any attachments
may contain confidential information for the use of the designated
recipients named above. If you are not the intended recipient, you
are hereby notified that you have received this communication in error
and that any review, disclosure, dissemination, distribution or
copying of it or its contents is prohibited. If you have received
this communication in error, please notify Stanford Medical Center
immediately by telephone at (650) 725-5722 and destroy all copies of
this communication and any attachments. Thank you.
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