Dear Volkmar,
Thank-you for your reply. Multiple regression was my first thought, however, I am confused as to how to enter the scans for the 2 groups in the multiple regression model in SPM5 (unlike the two-sample t-test, where it asks for scans for Group 1 and Group 2, the multiple regression only has an entry for "scans").
Thank-you for your help,
Julie
Julie E. McEntee, M.A., C.C.R.P.
Senior Research Program Coordinator
Department of Psychiatry- Neuroimaging
Johns Hopkins University School of Medicine
600 N. Wolfe St./ Phipps 300
Baltimore, MD 21287
Phone: 410-502-0468
Fax: 410-614-3676
----- Original Message -----
From: Volkmar Glauche <[log in to unmask]>
Date: Wednesday, January 7, 2009 9:34 am
Subject: Re: [SPM] fMRI 2nd-level analysis with covariates
To: Julie E McEntee <[log in to unmask]>
Cc: [log in to unmask]
> Dear Julie,
>
> there are many different ways to model this: you could use a 2-sample
> t-test and include the FA vector as covariate. Alternatively, you could
> enter both "years of education" and FA as covariates in a multiple
> regression model. To assess correlation with the FA vector, you would
> simply weight its column with "1", and the other columns with "0".
>
> Hope this helps,
>
> Volkmar
>
>
> Am Montag, den 05.01.2009, 12:02 -0500 schrieb Julie E McEntee:
> > It's a vector containing the mean FA value for each subject.
> >
> > Julie E. McEntee, M.A., C.C.R.P.
> > Senior Research Program Coordinator
> > Department of Psychiatry- Neuroimaging
> > Johns Hopkins University School of Medicine
> > 600 N. Wolfe St./ Phipps 300
> > Baltimore, MD 21287
> > Phone: 410-502-0468
> > Fax: 410-614-3676
> >
> > ----- Original Message -----
> > From: "MCLAREN, Donald" <[log in to unmask]>
> > Date: Monday, January 5, 2009 11:50 am
> > Subject: Re: [SPM] fMRI 2nd-level analysis with covariates
> > To: Julie E McEntee <[log in to unmask]>
> >
> >
> > > Is the covariate of interest the FA value extracted from a region
> or
> > > the FA
> > > value at each voxel?
> > >
> > > On Mon, Jan 5, 2009 at 10:38 AM, Julie E McEntee
> <[log in to unmask]>
> > > wrote:
> > >
> > > > Hello SPMers,
> > > >
> > > > I am using the latest version/update of SPM5 with MatLab 7.0
> on
> > > Windows XP
> > > > Professional 2002, service pack 3.
> > > >
> > > > I have 1st-level analyses (.con hdr/image files) consisting of
> the
> > > > difference between 2 task conditions for each of 2 groups
> (patients
> > > and
> > > > controls).
> > > >
> > > > There is a statistically significant difference between the 2
>
> > > groups in
> > > > years of education. I would like to include this as a
> "nuisance"
> > > variable at
> > > > 2nd-level analysis. I would also like to include a "covariate
> of interest"
> > > > (in this case fractional anisotrophy- FA). There is no
> correlation
> > > between
> > > > these 2 variables.
> > > >
> > > > What test should I use at the 2nd-level (and subsequent
> definition
> > > of
> > > > contrast weights) to answer the queston:
> > > >
> > > > Is FA related to the difference in BOLD response between groups?
> > > >
> > > > Thank-you for your help,
> > > >
> > > > Julie
> > > >
> > > > Julie E. McEntee, M.A., C.C.R.P.
> > > > Senior Research Program Coordinator
> > > > Department of Psychiatry- Neuroimaging
> > > > Johns Hopkins University School of Medicine
> > > > 600 N. Wolfe St./ Phipps 300
> > > > Baltimore, MD 21287
> > > > Phone: 410-502-0468
> > > > Fax: 410-614-3676
> > > >
> > >
> > >
> > >
> > > --
> > > Best Regards, Donald McLaren
> > > =====================
> > > D.G. McLaren
> > > University of Wisconsin - Madison
> > > Neuroscience Training Program
> > > Office: (608) 265-9672
> > > Lab: (608) 256-1901 ext 12914
> > > =====================
> > > This e-mail contains CONFIDENTIAL INFORMATION which may contain
> PROTECTED
> > > HEALTHCARE INFORMATION and may also be LEGALLY PRIVILEGED and
> which is
> > > intended only for the use of the individual or entity named
> above. If
> > > the
> > > reader of the e-mail is not the intended recipient or the
> employee or
> > > agent
> > > responsible for delivering it to the intended recipient, you are
> hereby
> > > notified that you are in possession of confidential and privileged
> > > information. Any unauthorized use, disclosure, copying or the
> taking
> > > of any
> > > action in reliance on the contents of this information is strictly
> > > prohibited and may be unlawful. If you have received this e-mail
> > > unintentionally, please immediately notify the sender via
> telephone
> > > at (608)
> > > 265-9672 or email.
> >
> --
> Volkmar Glauche
> -
> Department of Neurology [log in to unmask]
> Universitaetsklinikum Freiburg Phone 49(0)761-270-5331
> Breisacher Str. 64 Fax 49(0)761-270-5416
> 79106 Freiburg
>
>
|