Dear ÍõÑ壨ÂÞ·Ç¿ÎÌ⣩,
Try download Centos version fsl. BTW, always using root is not a good idea.
Best Regards
¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡Feng Xue
¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡[log in to unmask]
¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡2009-01-14
National Key Laboratory of Cognitive Neuroscience and Learning
Beijing Normal University
Beijing, China. 100875
Tel: 86-13810154455(m)
Fax: 86-10-58806154(o)
web: http://psychbrain.bnu.edu.cn
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======= 2009-01-14 22:06:18 U wrote£º=======
> Hi,Dave,
>
>Thanks for your quick reply.
>
>
>
>I am running on linux redflag(not redhat) desktop 5, and the downloaded FSL version is fsl-4.1.2-macosx.tar.gz.
>The following are the requried info by Dave:
>
>
>
>[root@localhost ~]# FSLDIR=/usr/local/fsl
>
>[root@localhost ~]# . ${FSLDIR}/etc/fslconf/fsl.sh
>
>[root@localhost ~]# set | grep FSL
>
>FSLCONFDIR=/usr/local/fsl/config
>
>FSLDIR=/usr/local/fsl
>
>FSLLOCKDIR=
>
>FSLMACHINELIST=
>
>FSLMACHTYPE=linux_32-gcc3.4
>
>FSLMULTIFILEQUIT=TRUE
>
>FSLOUTPUTTYPE=NIFTI_GZ
>
>FSLREMOTECALL=
>
>FSLTCLSH=/usr/local/fsl/bin/fsltclsh
>
>FSLWISH=/usr/local/fsl/bin/fslwish
>
>[root@localhost ~]# fsl
>
>bash: fsl: command not found
>
>[root@localhost ~]# ls $FSLDIR
>
>build config data doc etc extras LICENCE README src
>
>[root@localhost ~]#
>
>
>It is said to be there shall be a "bin" file yet no such file exists....
>
>
>To the last two question: Yes, I log in as root, and it seems to be fine; I didn't use another user account.
>
>
>
>
>
>> Hm, I'd be very surprised if that was so! What OS are we talking about here? After running the ". ${FSLDIR}/etc/fslconf/fsl.sh", type "set | grep FSL" you should get a list of 5 or 6 environment variables; what are their values? Also send us the output of "ls $FSLDIR". Finally, shouldn't really be a problem but, why are you running as root? Do you get different behaviour if you run as a regular user?
>
>>
>
>> ------Original Message------
>
>> From: Zareal Wang
>
>> Sender: FSL - FMRIB's Software Library
>
>> To: [log in to unmask]
>
>> ReplyTo: FSL - FMRIB's Software Library
>
>> Sent: 14 Jan 2009 04:44
>
>> Subject: [FSL] bash does not recognize ". $..."
>
>>
>
>> [root@localhost ~]# FSLDIR=/usr/local/fsl
>
>> [root@localhost ~]# . ${FSLDIR}/etc/fslconf/fsl.sh
>
>> [root@localhost ~]# PATH=${FSLDIR}/bin:${PATH}
>
>> [root@localhost ~]# export FSLDIR PATH
>
>> [root@localhost ~]# fsl
>
>> bash: fsl: command not found
>
>> [root@localhost ~]#
>
>>
>
>> As above, bash did not really exectue the ". &..." command and sometime
>
>> couldn't recognize it and other command.
>
>>
>
>> In addtion, I tried to search the .profile, yet failed. Althouth I found the
>
>> .bashrc, but after changing some contents, fsl simply would not work.
>
>>
>
>> Thanks for advice.
>
>>
>
>>
>
>>
>
>> Sent using BlackBerry? from Orange
>
>
>
>
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