In order to avoid massive re-writes, I took a few short cuts by not filling in
all NIfTI fields as they should be. See
http://nifti.nimh.nih.gov/nifti-1/support/SPM5andNIFTI1/ for more
information. I have been told that there is more to life than sorting out
data formats.
Best regards,
-John
On Friday 28 November 2008 09:52, Cecile Bordier wrote:
> Dear all,
>
> My questions concern the writing of Nifti files using SPM8:
>
> - does the last version of SPM fill all relevant Nifti fields when
> writing a Nifti image?
> It seems that it is not the case, for instance :
> - after normalisation only the description field is set at "spm - 3D
> normalized". The intend form of the image does not seem to follow Nifti
> definition and is set to "Aligned".
> - after normalisation the affine no rigid matrix should appear in the
> srow and this is not the case apparently. I cant find it anywhere. It
> seems that this information is lost when the normalised image is written.
>
> Thanks a lot for your help.
> Best regards,
>
> Cecile
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