Hi,
This is nothing to worry about. The analysis is fine.
The message is reported because you've called one of your custom EVs
with a
name that contains the word "error" (i.e. /Volumes/Data1/Kids_Flanker/
templates/s77_errors.txt).
At present we just check for the presence of the word error in the
logs, and so
your input file matches that. I cannot see any real errors.
We hope to make this a bit more sophisticated in future releases.
All the best,
Mark
On 28 Nov 2008, at 17:22, Laura Chaddock wrote:
> Hi!
>
> I am hoping to post the following error message . . . . .
>
> But it seems that my message size exceeds the maximum message size?
>
> Any chance we can make this work?
>
> THANK YOU!! Please keep me posted.
>
> ---------- Forwarded message ----------
> From: JISCMAIL LISTSERV Server (15.0) <[log in to unmask]>
> Date: Fri, Nov 28, 2008 at 11:19 AM
> Subject: Rejected posting to [log in to unmask]
> To: Laura Chaddock <[log in to unmask]>
>
>
> Your message cannot be distributed to the FSL list because it
> exceeds the
> maximum message size of 50k. The size of your message was 56,548
> bytes.
>
> This limit has been set by the list owner and does not necessarily
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>
> ---------- Forwarded message ----------
> From: "Laura Chaddock" <[log in to unmask]>
> To: [log in to unmask]
> Date: Fri, 28 Nov 2008 11:18:54 -0600
> Subject: FEAT error message
> Hi!
>
> I am trying to run first level analyses in FEAT . . .
>
> And I am encountering an error message at the top of the FEAT
> "report report.html" websites for all of my subjects.
>
> The error message states:
>
> "Errors occured during the analysis"
>
> However, the log (please see below) does not indicate any errors.
>
> Any ideas / suggestions? The error message appeared for my subjects
> as soon as I switched to the updated version of FSL.
>
> I would appreciate any feedback! Thanks!!
> Laura
>
>
> --------
>
> FEAT Report
> /Volumes/Data1/Kids_Flanker/sub77_1/Flanker/filtered.feat
> Finished at Thu Nov 20 21:40:09 CST 2008
>
>
> Errors occured during the analysis
>
>
> Progress Report / Log
>
> Started at Thu Nov 20 21:30:59 CST 2008
> Feat main script
>
>
> /bin/cp /Volumes/Data1/Kids_Flanker/sub77_1/sub77_1.fsf design.fsf
>
> /Applications/fsl/bin/feat_model design
>
> mkdir .files;cp /Applications/fsl/doc/fsl.css .files;ln -s /
> Applications/fsl/doc/images .files/images
>
> /Applications/fsl/bin/fsl_sub -T 24 -l logs -N feat2_pre /
> Applications/fsl/bin/feat /Volumes/Data1/Kids_Flanker/sub77_1/
> Flanker/filtered.feat/design.fsf -D /Volumes/Data1/Kids_Flanker/
> sub77_1/Flanker/filtered.feat -I 1 -prestats
> 408
>
> /Applications/fsl/bin/fsl_sub -T 148 -l logs -N feat3_film -j 408 /
> Applications/fsl/bin/feat /Volumes/Data1/Kids_Flanker/sub77_1/
> Flanker/filtered.feat/design.fsf -D /Volumes/Data1/Kids_Flanker/
> sub77_1/Flanker/filtered.feat -I 1 -film
> 2980
>
> /Applications/fsl/bin/fsl_sub -T 6 -l logs -N feat4_post -j 2980 /
> Applications/fsl/bin/feat /Volumes/Data1/Kids_Flanker/sub77_1/
> Flanker/filtered.feat/design.fsf -D /Volumes/Data1/Kids_Flanker/
> sub77_1/Flanker/filtered.feat -poststats 0 0
> 3147
>
> /Applications/fsl/bin/fsl_sub -T 30 -l logs -N feat5_reg -j 408 /
> Applications/fsl/bin/feat /Volumes/Data1/Kids_Flanker/sub77_1/
> Flanker/filtered.feat/design.fsf -D /Volumes/Data1/Kids_Flanker/
> sub77_1/Flanker/filtered.feat -I 1 -reg
> 4510
>
> /Applications/fsl/bin/fsl_sub -T 15 -l logs -N feat4_post -j
> 3147,4510 /Applications/fsl/bin/feat /Volumes/Data1/Kids_Flanker/
> sub77_1/Flanker/filtered.feat/design.fsf -D /Volumes/Data1/
> Kids_Flanker/sub77_1/Flanker/filtered.feat -poststats 1 0
> 4817
>
> /Applications/fsl/bin/fsl_sub -T 1 -l logs -N feat5_stop -j
> 408,2980,4817,4510 /Applications/fsl/bin/feat /Volumes/Data1/
> Kids_Flanker/sub77_1/Flanker/filtered.feat/design.fsf -D /Volumes/
> Data1/Kids_Flanker/sub77_1/Flanker/filtered.feat -stop
> Prestats
>
> /Applications/fsl/bin/fslmaths /Volumes/Data1/Kids_Flanker/sub77_1/
> Flanker/filtered prefiltered_func_data -odt float
> Total original volumes = 247
>
> /Applications/fsl/bin/fslroi prefiltered_func_data example_func 123 1
>
> /Applications/fsl/bin/fslmaths prefiltered_func_data -Tmean mean_func
>
> /Applications/fsl/bin/bet2 mean_func mask -f 0.3 -n -m; /
> Applications/fsl/bin/immv mask_mask mask
>
> /Applications/fsl/bin/fslmaths prefiltered_func_data -mas mask
> prefiltered_func_data_bet
>
> /Applications/fsl/bin/fslstats prefiltered_func_data_bet -p 2 -p 98
> 0.000000 2337.000000
>
> /Applications/fsl/bin/fslmaths prefiltered_func_data_bet -thr 233.7 -
> Tmin -bin mask -odt char
>
> /Applications/fsl/bin/fslstats prefiltered_func_data -k mask -p 50
> 1974.000000
>
> /Applications/fsl/bin/fslmaths mask -dilF mask
>
> /Applications/fsl/bin/fslmaths prefiltered_func_data -mas mask
> prefiltered_func_data_thresh
>
> /Applications/fsl/bin/fslmaths prefiltered_func_data_thresh -Tmean
> mean_func
>
> /Applications/fsl/bin/susan prefiltered_func_data_thresh 1480.5
> 2.12314225053 3 1 1 mean_func 1480.5 prefiltered_func_data_smooth
>
> /Applications/fsl/bin/fslmaths prefiltered_func_data_smooth -mas
> mask prefiltered_func_data_smooth
>
> /Applications/fsl/bin/fslmaths prefiltered_func_data_smooth -mul
> 5.06585612969 prefiltered_func_data_intnorm
>
> /Applications/fsl/bin/fslmaths prefiltered_func_data_intnorm -bptf
> 33.3333333333 -1 prefiltered_func_data_tempfilt
>
> /Applications/fsl/bin/fslmaths prefiltered_func_data_tempfilt
> filtered_func_data
>
> /Applications/fsl/bin/fslmaths filtered_func_data -Tmean mean_func
>
> /bin/rm -rf prefiltered_func_data*
> Stats
>
> mkdir -p custom_timing_files ; /bin/cp /Volumes/Data1/Kids_Flanker/
> templates/s77_con.txt custom_timing_files/ev1.txt
>
> mkdir -p custom_timing_files ; /bin/cp /Volumes/Data1/Kids_Flanker/
> templates/s77_inc.txt custom_timing_files/ev2.txt
>
> mkdir -p custom_timing_files ; /bin/cp /Volumes/Data1/Kids_Flanker/
> templates/s77_errors.txt custom_timing_files/ev3.txt
>
> ...
>
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