Dear Markus,
I renamed my file as you suggest me: *data.nii.gz* and
*nodif_brain_mask.nii.gz*..but I have:
[fsl@localhost ~]$ fsl&
[1] 8984
[fsl@localhost ~]$ bedpostx_datacheck dtidata
dtidata/data does not exist
dtidata/nodif_brain_mask does not exist
num lines in dtidata/bvals
cat: dtidata/bvals: No such file or directory
0
num words in dtidata/bvals
cat: dtidata/bvals: No such file or directory
0
num lines in dtidata/bvecs
cat: dtidata/bvecs: No such file or directory
0
num words in dtidata/bvecs
cat: dtidata/bvecs: No such file or directory
0
[fsl@localhost ~]$
I try with my files and with example files that I download from
http://www.sph.sc.edu/comd/rorden/workshop/fsl/dti/
In particular now I'm running fsl with these files.
Best regards,
Stefano
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