Hi,
If you've run su successfully then all you should need to do is:
- cd to the directory where the downloaded fsl is
- copy the fsl_installer.sh script here (if not already)
- run the installer by typing "bash fsl_installer.sh"
- once this has run, do "exit" (to stop being the superuser)
- cd to the directory where the downloaded fsl is
(again, but now as the "normal" user)
- run the installer as "bash fsl_installer.sh -e"
This should then set things up appropriately.
Let us know if it doesn't work.
All the best,
Mark
On 17 Oct 2008, at 18:53, SUBSCRIBE FSL Nima Kasraie wrote:
> The VMWare seems to run fine.
>
> When I type su and give the root password, it accepts. But when I try
> configuring the "shell setup file", the instructions on
> http://www.fmrib.ox.ac.uk/fsl/fsl/linux.html#autoenv are not very
> clear. How
> do I find a shell setup file, how do I change it?
>
> Otherwise, when I type in "fsh" at the prompt, the FSH menu bar does
> pop up,
> which shows that the program is running.
>
> How crucial is this configuration of the shell setup file?
>
>
> Thanks.
>
>
>
> On Fri, 17 Oct 2008 11:31:33 +0200, Markus Gschwind
> <[log in to unmask]> wrote:
>
>> Hi!
>> Are you installing in a vmware virtual machine?
>>
>> If so and your system is centOS downloaded form FSL,
>> it is described here http://www.fmrib.ox.ac.uk/fsl/fsl/windows.html
>> under Initial setup
>>
>> type su (=superuser)
>> and then give the password
>> fslroot
>>
>> If you are installing in a native Linux system, you might ask your
>> system
>> admin for the root password.
>>
>> Cheers,
>> Markus
>>
>> 2008/10/17 SUBSCRIBE FSL Nima Kasraie <[log in to unmask]>
>>
>>> Hi.
>>>
>>> I'm a total newbie in Linux. I'm trying to configure the Linux
>>> part of the
>>> installation of fsl on a XP machine.
>>>
>>> I cant get past the "bash fsl_installer.sh" part. It wont accept my
>>> password.
>>> And I dont even know if I have admin privs. I should, because Im
>>> installing on a home PC. But anyway, the insructions say that if
>>> it fails
>>> to
>>> install, then it "needs to be run as the root user":
>>>
>>> http://www.fmrib.ox.ac.uk/fsl/fsl/linux.html
>>>
>>> But Im not sure how to do that, or what it even means. Is there a
>>> way to
>>> get
>>> around this, and up and running?
>>>
>>> Any takers?
>>>
>>
>>
>>
>> --
>> Dr. med. Markus Gschwind, M.D.
>> Laboratory for Neurology and Imaging of Cognition
>> Dept of Neurosciences
>> University Medical Center (CMU)
>> 1 Michel-Servet - 1211 GENEVA - CH
>>
>> Tel 0041 (0) 22 379 5324
>> Fax 0041 (0) 22 379 5402
>> email: [log in to unmask]
>> http://labnic.unige.ch
>>
>
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