Dear Matthew,
Thanks for the feedback. I'll try that and see how that works.
Regards,
Tugan
On Wed, 10 Sep 2008 15:15:12 +0100, Matthew <[log in to unmask]> wrote:
>Hi,
> The preproc step does a small amount of image processing, including
some erosion on
>the input. The mask is used in the later steps of tbss, you could probably
skip
>tbss_1_preproc by using the fslmaths call in the script ( and manually
copying the mask
>).
>
>Regards
>
>Matthew
>
>>Hi,
>>
>>following up my earlier question regarding regions masked out by
>>tbbss_1_preproc: is this step doing anything other than masking? In the
>>previous version it was also doing some scaling, etc. If it is only masking,
>>I can mask them myself and skip tbss_1_preproc and proceed with tbss_2_reg.
>>Do I need to put my own mask files under ./FA directory for further steps,
>>or is it only used in tbss_1_preproc?
>>
>>Thanks again,
>>
>>Tugan Muftuler
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