Whoops, that looks like that function got removed (for some reason or
other). I've added it back in, hopefully correctly. The patches are on
the update server.
Wayne
On Tue, 23 Sep 2008, Justin Douglas wrote:
> Hi Wayne,
>
> I updated the pipe2azara script in the bin directory, however, the
> script doesn't work. I get the following traceback.
>
> Thanks,
>
> J
>
> Traceback (most recent call last):
> File "/Volumes/pardi-home/douglas/Documents/Programs/software/analysis/ccpnmr/ccpnmr2.0/python/ccp/format/spectra/params/NmrPipeData.py",
> line 200, in <module>
> convertXyzToAzara(pipeDataFileTemplate, azaraDataFile,
> azaraParFile, blockSize)
> File "/Volumes/pardi-home/douglas/Documents/Programs/software/analysis/ccpnmr/ccpnmr2.0/python/ccp/format/spectra/params/NmrPipeData.py",
> line 46, in convertXyzToAzara
> convertPipeToAzara(pipeParams, azaraDataFile, azaraParFile, totalBlockSize)
> File "/Volumes/pardi-home/douglas/Documents/Programs/software/analysis/ccpnmr/ccpnmr2.0/python/ccp/format/spectra/params/NmrPipeData.py",
> line 51, in convertPipeToAzara
> azaraParams = writeAzaraParFile(pipeParams, azaraDataFile,
> azaraParFile, totalBlockSize)
> File "/Volumes/pardi-home/douglas/Documents/Programs/software/analysis/ccpnmr/ccpnmr2.0/python/ccp/format/spectra/params/NmrPipeData.py",
> line 80, in writeAzaraParFile
> azaraParams.writeParFile()
> AttributeError: AzaraParams instance has no attribute 'writeParFile'
>
>
> On Fri, Sep 19, 2008 at 2:06 AM, Wayne Boucher <[log in to unmask]> wrote:
> > Hello,
> >
> > That's something that was noticed a few days ago but hard to fix by us
> > except in the next release (because it's specific to each machine). In
> > the pipe2azara script you will find the last line to be like (your python
> > will be different):
> >
> > /sw/bin/python -O
> > $CCPNMR_TOP_DIR/ccpnmr2.0/python/ccpnmr/analysis/NmrPipeData.py $1 $2 $3 $4 $5 $6
> >
> > That should instead say
> >
> > /sw/bin/python -O
> > $CCPNMR_TOP_DIR/ccpnmr2.0/python/ccp/format/spectra/params/NmrPipeData.py $1 $2 $3 $4 $5 $6
> >
> > So it's just that we moved the directory where the code lives and forgot
> > to update the code that generates the script.
> >
> > Wayne
> >
> > On Thu, 18 Sep 2008, Justin Douglas wrote:
> >
> >> Hi Tim and Wayne,
> >>
> >> The pipe2azara script (in bin) does not work in version2.0.
> >>
> >> Also, with regards to my last email. I've installed version2.0 on
> >> both my laptop and desktop computer. On my desktop, the "quit" option
> >> under Project was grayed out. On my laptop, the "quit" button is NOT
> >> grayed out.
> >>
> >> The desktop runs Mac OSX 10.4 (tiger), while the laptop runs 10.5 (Leopard).
> >>
> >> Just thought I should report this ......
> >>
> >> Thanks,
> >>
> >> J
> >>
> >
>
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