Aha, it is a bit tricky, but in order to get the the latest version
you must patch the one you have downloaded with the updates found in ftp://ftp.fil.ion.ucl.ac.uk/spm/spm5_updates
Best
Torben
Den 20/08/2008 kl. 16.17 skrev Marc Dubin:
> Hi Torben,
>
> I think I do have the latest version, as I'm pretty sure I
> downloaded it after 10/17/07.
> How would I check what version I have? Also, if I do need to update,
> how would I go about doing that? I have checked the ftp updates
> site, but there do not seem to be actual update files or
> instructions on how to install them.
>
> Also, could the problem be that I'm using the wrong kind of NIFTI
> file? I am using NIFTI, but I understand there are different flavors
> of NIFTI.
>
> Best,
> Marc
>
> On Wed, Aug 20, 2008 at 8:07 AM, Torben Ellegaard Lund <[log in to unmask]
> > wrote:
> Dear Marc
>
> For the intel mac you should need matlab 2007a or later so 7.4
> should be fine. On the wiki the SPM5 instruction starts with:
>
> "Since Revision 958 SPM5 include precompiled mex files for the intel
> mac (called mexmaci). So now all you need to do, is to install the
> latest Update."
>
> Have you installed the updates?
>
> Hope this helps
> Torben
>
> Den 20/08/2008 kl. 13.31 skrev Marc Dubin:
>
>
> Dear SPM Users,
>
> I am new to SPM and am having trouble with the basic functions to
> read in a NIFTI file.
> In particular, I get a "not compiled" error (at the bottom of the
> following I/O):
>
> I get this after compiling and installing the mexfiles quite
> carefully according to the instructions in
> the following link: (I am using Matlab 7.4 on an intel Mac, using
> OS X Leopard)
>
> http://en.wikibooks.org/wiki/SPM/Installation_on_Mac_OS_(Intel)
>
> Any suggestions on what I might be doing wrong would be greatly
> appreciated!
>
> Best,
> Marc
>
> >> a = spm_select(1, 'image')
>
> a =
>
> /Users/Marc/Documents/T32/Highrisk/compRH_tstat2.nii,1
>
> >> VI = spm_vol(a)
> Warning: Cant get default Analyze orientation - assuming flipped
> > In spm_flip_analyze_images at 13
> In @nifti/private/decode_qform0 at 13
> In nifti.subsref>rec at 106
> In nifti.subsref at 45
> In spm_vol_nifti at 28
> In spm_vol>subfunc at 122
> In spm_vol>subfunc1 at 83
> In spm_vol>subfunc2 at 71
> In spm_vol at 57
>
> VI =
>
> fname: '/Users/Marc/Documents/T32/Highrisk/compRH_tstat2.nii'
> mat: [4x4 double]
> dim: [82 154 123]
> dt: [16 0]
> pinfo: [3x1 double]
> n: [1 1]
> descrip: 'FSL4.0'
> private: [1x1 nifti]
>
> >> img = spm_read_vols(VI)
> ??? Error using ==> spm_slice_vol at 32
> spm_slice_vol.c not compiled - see Makefile
>
> Error in ==> spm_read_vols at 39
> Y(:,:,p,i) = spm_slice_vol(V(i),spm_matrix([0 0 p]),V(i).dim(1:2),
> 0);
>
>
>
> --
> Marc J. Dubin, MD PhD
> Postdoctoral Research Fellow
> New York State Psychiatric Institute
> Columbia University Medical College
>
> Office: 212-543-6702 Cell: 646-831-8886
>
>
>
>
> --
> Marc J. Dubin, MD PhD
> Postdoctoral Research Fellow
> New York State Psychiatric Institute
> Columbia University Medical College
>
> Office: 212-543-6702 Cell: 646-831-8886
|