On Tuesday 01 July 2008 18:47:05 Brian Smith wrote:
> For the NVidia cards I use I have
>
> GL_FLAG = -DUSE_GL_FALSE
>
> and
>
> GLUT_NEED_INIT =
>
> so definitely worth checking that setup first. Just edit
> <CCPNMR_HOME>ccpnmr1.0/c/environment.txt and
>
> make clean; make
>
> in <CCPNMR_HOME>ccpnmr1.0/c/ to apply the changes quickly.
This didn't work for me. :-(
> The other problem that can sometimes come up is with the dynamic library
> linking - I'm afraid I don't have experience of SUSE for this, but what
> you need to do is do your lsof on the python command rather than the shell
> command that started your analysis session, which will look something
> like:
>
> ps -efla | grep python
> brian 25851 25850 0 17:35 pts/2 00:00:01 /usr/bin/python -i -O
> /usr/local/ccpnmr/ccpnmr1.0/python/ccpnmr/analysis/AnalysisGui.py
>
> Thsn in the lsof output see which Gl libs are being picked up. It should
> be ones from the NVidia driver package rather than from the Mesa one.
Here the demanded output. Are the Gl libs also loaded when no Open-Gl enabled
porject is loaded? I'm asking because I'm not able to load or create an
project with OpenGL enabled.
best regards
Marco
blues:~ # ps -efla | grep python
0 S roeben 5280 5279 0 80 0 - 74601 select 10:17 pts/3 00:00:43
/usr/bin/python -i -O
/opt/ccpnmr/ccpnmr1.0/python/ccpnmr/analysis/AnalysisGui.py
0 R root 6465 6433 0 80 0 - 1071 - 11:37 pts/2 00:00:00
grep python
blues:~ # lsof -p 5280
COMMAND PID USER FD TYPE DEVICE SIZE/OFF NODE NAME
python 5280 roeben cwd DIR 0,20 4096 1654785
/homes/roeben (esau.fmp-berlin.de:/homes)
python 5280 roeben rtd DIR 8,2 4096 2 /
python 5280 roeben txt REG 8,2 6880 737293
/usr/bin/python2.5
python 5280 roeben mem REG 8,5 80543 51283
/opt/ccpnmr/ccpnmr1.0/c/memops/global/BlockFile.so
python 5280 roeben mem REG 8,2 71719 826208
/usr/share/ghostscript/fonts/n019023l.pfb
python 5280 roeben mem REG 8,2 169056 876029
/usr/share/fonts/truetype/albw.ttf
python 5280 roeben mem REG 8,3 411856 552176
/var/cache/fontconfig/17090aa38d5c6f09fb8c5c354938f1d7-x86-64.cache-2
python 5280 roeben mem REG 8,3 412560 552174
/var/cache/fontconfig/df311e82a1a24c41a75c2c930223552e-x86-64.cache-2
python 5280 roeben mem REG 8,2 44392 777510
/usr/lib64/libXcursor.so.1.0.2
python 5280 roeben mem REG 8,2 49120 318347
/lib64/libnss_files-2.8.so
python 5280 roeben mem REG 8,2 45152 318274
/lib64/libnss_nis-2.8.so
python 5280 roeben mem REG 8,2 92640 318281
/lib64/libnsl-2.8.so
python 5280 roeben mem REG 8,2 32408 318258
/lib64/libnss_compat-2.8.so
python 5280 roeben mem REG 8,5 57337 51342
/opt/ccpnmr/ccpnmr1.0/c/ccpnmr/analysis/ContourLevels.so
python 5280 roeben mem REG 8,5 57097 51341
/opt/ccpnmr/ccpnmr1.0/c/ccpnmr/analysis/ContourStyle.so
python 5280 roeben mem REG 8,2 42048 882460
/usr/lib64/python2.5/lib-dynload/itertools.so
python 5280 roeben mem REG 8,5 166630 51325
/opt/ccpnmr/ccpnmr1.0/c/ccp/structure/StructStructure.so
python 5280 roeben mem REG 8,5 55784 51319
/opt/ccpnmr/ccpnmr1.0/c/ccp/structure/StructBond.so
python 5280 roeben mem REG 8,5 50498 51317
/opt/ccpnmr/ccpnmr1.0/c/ccp/structure/StructAtom.so
python 5280 roeben mem REG 8,5 51275 51295
/opt/ccpnmr/ccpnmr1.0/c/memops/global/PsHandler.so
python 5280 roeben mem REG 8,5 51322 51292
/opt/ccpnmr/ccpnmr1.0/c/memops/global/PdfHandler.so
python 5280 roeben mem REG 8,5 67644 51303
/opt/ccpnmr/ccpnmr1.0/c/memops/global/FitMethod.so
python 5280 roeben mem REG 8,5 53607 51330
/opt/ccpnmr/ccpnmr1.0/c/ccp/structure/StructUtil.so
python 5280 roeben mem REG 8,5 224766 51355
/opt/ccpnmr/ccpnmr1.0/c/ccpnmr/analysis/WinPeakList.so
python 5280 roeben mem REG 8,5 181089 51352
/opt/ccpnmr/ccpnmr1.0/c/ccpnmr/analysis/SliceFile.so
python 5280 roeben mem REG 8,5 119870 51349
/opt/ccpnmr/ccpnmr1.0/c/ccpnmr/analysis/PeakList.so
python 5280 roeben mem REG 8,5 216371 51340
/opt/ccpnmr/ccpnmr1.0/c/ccpnmr/analysis/ContourFile.so
python 5280 roeben mem REG 8,5 44668 51310
/opt/ccpnmr/ccpnmr1.0/c/memops/global/StoreFile.so
python 5280 roeben mem REG 8,5 51789 51289
/opt/ccpnmr/ccpnmr1.0/c/memops/global/MemCache.so
python 5280 roeben mem REG 8,2 44072 777544
/usr/lib64/libdrm.so.2.3.0
python 5280 roeben mem REG 8,2 23304 777519
/usr/lib64/libXfixes.so.3.1.0
python 5280 roeben mem REG 8,2 10680 777623
/usr/lib64/libXdamage.so.1.1.0
python 5280 roeben mem REG 8,2 101024 318269
/lib64/libgcc_s.so.1
python 5280 roeben mem REG 8,2 1027880 777266
/usr/lib64/libstdc++.so.6.0.10
python 5280 roeben mem REG 8,2 23248 777534
/usr/lib64/libXxf86vm.so.1.0.0
python 5280 roeben mem REG 8,2 521120 777504
/usr/lib64/libGL.so.1.2
python 5280 roeben mem REG 8,2 554968 777485
/usr/lib64/libGLU.so.1.3.070003
python 5280 roeben mem REG 8,2 286288 777594
/usr/lib64/libglut.so.3.8.0
python 5280 roeben mem REG 8,5 68952 51288
/opt/ccpnmr/ccpnmr1.0/c/memops/global/GlHandler.so
python 5280 roeben mem REG 8,5 67256 51307
/opt/ccpnmr/ccpnmr1.0/c/memops/global/TkHandler.so
python 5280 roeben mem REG 8,2 79384 882431
/usr/lib64/python2.5/lib-dynload/cPickle.so
python 5280 roeben mem REG 8,2 15712 882441
/usr/lib64/python2.5/lib-dynload/_random.so
python 5280 roeben mem REG 8,2 42728 882450
/usr/lib64/python2.5/lib-dynload/array.so
python 5280 roeben mem REG 8,2 36832 882463
/usr/lib64/python2.5/lib-dynload/operator.so
python 5280 roeben mem REG 8,2 1601472 777276
/usr/lib64/libcrypto.so.0.9.8
python 5280 roeben mem REG 8,2 321488 776815
/usr/lib64/libssl.so.0.9.8
python 5280 roeben mem REG 8,2 20920 882443
/usr/lib64/python2.5/lib-dynload/_ssl.so
python 5280 roeben mem REG 8,2 60552 882458
/usr/lib64/python2.5/lib-dynload/_socket.so
python 5280 roeben mem REG 8,2 122124 956674
/usr/share/fonts/Type1/couri.pfa
python 5280 roeben mem REG 8,3 382858 551639
/var/cache/libx11/compose/l4_030_313cb605_00280cc0
python 5280 roeben mem REG 8,2 25000 882454
/usr/lib64/python2.5/lib-dynload/binascii.so
python 5280 roeben mem REG 8,2 35464 882428
/usr/lib64/python2.5/lib-dynload/_struct.so
python 5280 roeben mem REG 8,2 18616 882445
/usr/lib64/python2.5/lib-dynload/fcntl.so
python 5280 roeben mem REG 8,2 17464 882413
/usr/lib64/python2.5/lib-dynload/select.so
python 5280 roeben mem REG 8,2 23040 882408
/usr/lib64/python2.5/lib-dynload/cStringIO.so
python 5280 roeben mem REG 8,2 27280 882421
/usr/lib64/python2.5/lib-dynload/collections.so
python 5280 roeben mem REG 8,2 80736 882436
/usr/lib64/python2.5/lib-dynload/datetime.so
python 5280 roeben mem REG 8,2 27928 882459
/usr/lib64/python2.5/lib-dynload/strop.so
python 5280 roeben mem REG 8,2 17816 882429
/usr/lib64/python2.5/lib-dynload/math.so
python 5280 roeben mem REG 8,2 24280 882435
/usr/lib64/python2.5/lib-dynload/time.so
python 5280 roeben mem REG 8,2 170704 318256
/lib64/libexpat.so.1.5.2
python 5280 roeben mem REG 8,2 11352 777268
/usr/lib64/libXau.so.6.0.0
python 5280 roeben mem REG 8,2 114608 777330
/usr/lib64/libxcb.so.1.0.0
python 5280 roeben mem REG 8,2 6528 777365
/usr/lib64/libxcb-xlib.so.0.0.0
python 5280 roeben mem REG 8,2 40792 777520
/usr/lib64/libXrender.so.1.3.0
python 5280 roeben mem REG 8,2 223288 777308
/usr/lib64/libfontconfig.so.1.2.0
python 5280 roeben mem REG 8,2 89888 318353
/lib64/libz.so.1.2.3
python 5280 roeben mem REG 8,2 535472 777347
/usr/lib64/libfreetype.so.6.3.16
python 5280 roeben mem REG 8,2 87024 777601
/usr/lib64/libXft.so.2.1.2
python 5280 roeben mem REG 8,2 75048 777329
/usr/lib64/libXext.so.6.4.0
python 5280 roeben mem REG 8,2 15016 777629
/usr/lib64/libXss.so.1.0.0
python 5280 roeben mem REG 8,2 1331232 777069
/usr/lib64/libX11.so.6.2.0
python 5280 roeben mem REG 8,2 1182088 779225
/usr/lib64/libtcl8.5.so
python 5280 roeben mem REG 8,2 1339472 779808
/usr/lib64/libtk8.5.so
python 5280 roeben mem REG 8,2 1201896 779812
/usr/lib64/libBLT24.so
python 5280 roeben mem REG 8,2 56272 883760
/usr/lib64/python2.5/lib-dynload/_tkinter.so
python 5280 roeben mem REG 8,2 299848 318339
/lib64/libncurses.so.5.6
python 5280 roeben mem REG 8,2 346784 318356
/lib64/libncursesw.so.5.6
python 5280 roeben mem REG 8,2 266272 318363
/lib64/libreadline.so.5.2
python 5280 roeben mem REG 8,2 27008 882461
/usr/lib64/python2.5/lib-dynload/readline.so
python 5280 roeben mem REG 8,2 1495120 318344
/lib64/libc-2.8.so
python 5280 roeben mem REG 8,2 380776 318343
/lib64/libm-2.8.so
python 5280 roeben mem REG 8,2 11592 318283
/lib64/libutil-2.8.so
python 5280 roeben mem REG 8,2 16040 318254
/lib64/libdl-2.8.so
python 5280 roeben mem REG 8,2 142867 318247
/lib64/libpthread-2.8.so
python 5280 roeben mem REG 8,2 1455992 777667
/usr/lib64/libpython2.5.so.1.0
python 5280 roeben mem REG 8,2 131240 318284
/lib64/ld-2.8.so
python 5280 roeben mem REG 8,2 68590 826184
/usr/share/ghostscript/fonts/n019003l.pfb
python 5280 roeben mem REG 8,2 22097 873682
/usr/share/fonts/misc/clR6x12.pcf.gz
python 5280 roeben mem REG 8,2 126064 956668
/usr/share/fonts/Type1/cour.pfa
python 5280 roeben mem REG 8,3 38544 552178
/var/cache/fontconfig/77e41c5059666d75f92e318d4be8c21e-x86-64.cache-2
python 5280 roeben mem REG 8,3 21648 552214
/var/cache/fontconfig/c16af864172909159ced9a806109b5c1-x86-64.cache-2
python 5280 roeben mem REG 8,3 197008 552218
/var/cache/fontconfig/8d4af663993b81a124ee82e610bb31f9-x86-64.cache-2
python 5280 roeben mem REG 8,2 26042 776880
/usr/lib64/gconv/gconv-modules.cache
python 5280 roeben mem REG 8,2 254076 752403
/usr/lib/locale/en_US.utf8/LC_CTYPE
python 5280 roeben mem REG 8,3 11112 552182
/var/cache/fontconfig/8651933d928ee6bc281430db858b65db-x86-64.cache-2
python 5280 roeben mem REG 8,3 2024 552181
/var/cache/fontconfig/17eac1165263be9f8c818b6f419cf6e6-x86-64.cache-2
python 5280 roeben mem REG 8,3 26000 552177
/var/cache/fontconfig/d62e99ef547d1d24cdb1bd22ec1a2976-x86-64.cache-2
python 5280 roeben mem REG 8,3 117720 552165
/var/cache/fontconfig/7ef2298fde41cc6eeb7af42e48b7d293-x86-64.cache-2
python 5280 roeben mem REG 8,3 1896 552208
/var/cache/fontconfig/cf6c88e680607f2ab796171745f068a4-x86-64.cache-2
python 5280 roeben 0u CHR 136,3 0t0 5 /dev/pts/3
python 5280 roeben 1u CHR 136,3 0t0 5 /dev/pts/3
python 5280 roeben 2u CHR 136,3 0t0 5 /dev/pts/3
python 5280 roeben 3u unix 0xffff810108580600 0t0 20682 socket
python 5280 roeben 4r REG 0,20 33554432 9437293
/homes/roeben/Projects/Cph1/data/cph1-gold/nmr/pscph1d2d.070316/3/pdata/1/2rr
(esau.fmp-berlin.de:/homes)
python 5280 roeben 10u REG 8,3 4296704 81139
/var/tmp/kdecache-roeben/kpc/kde-icon-cache.index
python 5280 roeben 11u REG 8,3 16240640 81170
/var/tmp/kdecache-roeben/kpc/kde-icon-cache.data
--
Dipl. Chem. Marco Röben
Leibniz Institute of Molecular Pharmacology (FMP)
dep.: Solution NMR
Robert-Rössle-Str. 10
D-13125 Berlin
+49-30-94793224 (phone)
+49-030-94793169 (fax)
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